Gene detail information of Glyur000420s00021419 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G29300.1 | 8.00E-136 | Plant protein of unknown function (DUF641) |
| NR | XP_007159484.1 | 0 | hypothetical protein PHAVU_002G241300g [Phaseolus vulgaris] |
| trEMBL | tr|V7CQ35|V7CQ35_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW31478.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00420 | 27760 | 29127 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000420s00021419.1 | PF04859.7 | DUF641 | 57 | 187 | 5.90E-45 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.271 |
| SRR1783600 | control | 9.566 |
| SRR1783602 | moderate drought stress | 5.169 |
| SRR1811619 | moderate drought stress | 5.140 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.883 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.910 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.263 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.292 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.136 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.130 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.654 |
| SRR2868004 | Drought Stress (root) | 2.240 |
| SRR2967015 | Control (root) | 2.239 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.219 |
| SRR9715740 | Leaf | 0.054 |
| SRR9715741 | Leaf | 0.096 |
| SRR9715739 | Root | 0.590 |
| SRR9715742 | Root | 0.331 |
| SRR9715743 | Root | 0.613 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.144 |
| SRR8749028 | MeJA induced 9h | 0.964 |
| SRR8749029 | MeJA induced 9h | 0.649 |
| SRR8749030 | Uninduced | 0.106 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.075 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.847 |
| SRR8400027 | Control - Root | 3.023 |