Gene detail information of Glyur000418s00021351 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G39240.1 | 3.00E-10 | |
| NR | AFK40399.1 | 1.44E-30 | unknown [Lotus japonicus] |
| trEMBL | tr|I3SJF7|I3SJF7_LOTJA | 5.00E-31 | Uncharacterized protein {ECO:0000313|EMBL:AFK40399.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00418 | 109143 | 109382 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.794 |
| SRR1783600 | control | 1.756 |
| SRR1783602 | moderate drought stress | 2.308 |
| SRR1811619 | moderate drought stress | 2.102 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.700 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.585 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.258 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.013 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.170 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.766 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.171 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.850 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.265 |
| SRR2868004 | Drought Stress (root) | 4.595 |
| SRR2967015 | Control (root) | 4.106 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.217 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.192 |
| SRR9715739 | Root | 0.206 |
| SRR9715742 | Root | 0.892 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.094 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.352 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.253 |
| SRR8400027 | Control - Root | 3.310 |