Gene detail information of Glyur000418s00021347 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G02120.1 | 5.00E-08 | hydroxyproline-rich glycoprotein family protein |
| NR | NP_001235757.1 | 7.45E-54 | uncharacterized protein LOC100305464 [Glycine max] |
| trEMBL | tr|I1LWS3|I1LWS3_SOYBN | 4.00E-55 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G06190.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00418 | 78980 | 79902 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.551 |
| SRR1783600 | control | 10.934 |
| SRR1783602 | moderate drought stress | 6.933 |
| SRR1811619 | moderate drought stress | 6.519 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 15.977 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 16.940 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.928 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.778 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.290 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 14.383 |
| SRR2868004 | Drought Stress (root) | 4.563 |
| SRR2967015 | Control (root) | 6.390 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.669 |
| SRR9715740 | Leaf | 0.159 |
| SRR9715741 | Leaf | 0.848 |
| SRR9715739 | Root | 0.748 |
| SRR9715742 | Root | 0.846 |
| SRR9715743 | Root | 0.891 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 13.129 |
| SRR8749028 | MeJA induced 9h | 9.187 |
| SRR8749029 | MeJA induced 9h | 6.767 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.125 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 15.773 |
| SRR8400027 | Control - Root | 10.687 |