Gene detail information of Glyur000418s00021345 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G39210.1 | 6.00E-30 | chlororespiratory reduction 7 |
| NR | AFK35111.1 | 1.28E-84 | unknown [Lotus japonicus] |
| trEMBL | tr|I3S4B9|I3S4B9_LOTJA | 5.00E-85 | Uncharacterized protein {ECO:0000313|EMBL:AFK35111.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00418 | 76951 | 78544 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000418s00021345.1 | PF12095.3 | DUF3571 | 73 | 151 | 1.70E-22 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.200 |
| SRR1783600 | control | 0.189 |
| SRR1783602 | moderate drought stress | 0.098 |
| SRR1811619 | moderate drought stress | 0.104 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.304 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.296 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 111.992 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 111.630 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.657 |
| SRR2868004 | Drought Stress (root) | 5.651 |
| SRR2967015 | Control (root) | 4.737 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 101.894 |
| SRR9715740 | Leaf | 167.565 |
| SRR9715741 | Leaf | 147.332 |
| SRR9715739 | Root | 0.068 |
| SRR9715742 | Root | 0.084 |
| SRR9715743 | Root | 0.252 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.432 |
| SRR8749028 | MeJA induced 9h | 1.203 |
| SRR8749029 | MeJA induced 9h | 1.551 |
| SRR8749030 | Uninduced | 1.534 |
| SRR8749031 | Uninduced | 1.228 |
| SRR8749032 | Uninduced | 1.668 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.659 |
| SRR8400027 | Control - Root | 3.142 |