Gene detail information of Glyur000418s00021335 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G74160.1 | 1.00E-41 | |
| NR | KHN07131.1 | 0 | hypothetical protein glysoja_031992 [Glycine soja] |
| Swissprot | tr|Q9LF24|LNG1_ARATH | 2.00E-43 | Protein LONGIFOLIA 1 |
| trEMBL | tr|K7LXM7|K7LXM7_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G06290.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00418 | 13847 | 15683 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000418s00021335.1 | PF14309.1 | DUF4378 | 336 | 511 | 1.00E-37 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.660 |
| SRR1783600 | control | 1.582 |
| SRR1783602 | moderate drought stress | 0.313 |
| SRR1811619 | moderate drought stress | 0.314 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.070 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.070 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.286 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.468 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.397 |
| SRR2868004 | Drought Stress (root) | 3.382 |
| SRR2967015 | Control (root) | 3.588 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.070 |
| SRR9715740 | Leaf | 2.258 |
| SRR9715741 | Leaf | 4.311 |
| SRR9715739 | Root | 0.016 |
| SRR9715742 | Root | 0.197 |
| SRR9715743 | Root | 0.051 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.043 |
| SRR8749029 | MeJA induced 9h | 0.077 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.097 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.764 |
| SRR8400027 | Control - Root | 0.922 |