Gene detail information of Glyur000418s00021333 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G26355.1 | 1.00E-11 | SPIRAL1-like1 |
| NR | KHN07127.1 | 2.24E-50 | hypothetical protein glysoja_031988 [Glycine soja] |
| Swissprot | tr|B3H4F1|SP1L1_ARATH | 3.00E-34 | Protein SPIRAL1-like 1 |
| trEMBL | tr|I1LWT2|I1LWT2_SOYBN | 3.00E-56 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G06390.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00418 | 824 | 2032 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 18.264 |
| SRR1783600 | control | 18.463 |
| SRR1783602 | moderate drought stress | 21.424 |
| SRR1811619 | moderate drought stress | 21.526 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 24.273 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 23.868 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 25.367 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 24.922 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 31.545 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 32.148 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 31.620 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 31.458 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 94.045 |
| SRR2868004 | Drought Stress (root) | 68.838 |
| SRR2967015 | Control (root) | 76.165 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 125.617 |
| SRR9715740 | Leaf | 87.310 |
| SRR9715741 | Leaf | 89.375 |
| SRR9715739 | Root | 64.988 |
| SRR9715742 | Root | 40.381 |
| SRR9715743 | Root | 45.041 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.159 |
| SRR8749028 | MeJA induced 9h | 9.582 |
| SRR8749029 | MeJA induced 9h | 6.243 |
| SRR8749030 | Uninduced | 5.703 |
| SRR8749031 | Uninduced | 1.277 |
| SRR8749032 | Uninduced | 4.123 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 79.973 |
| SRR8400027 | Control - Root | 89.848 |