Gene detail

Gene detail information of Glyur000417s00031395

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G16520.3	3.00E-110	UDP-glucosyl transferase 88A1
NR	XP_003533971.1	0	PREDICTED: UDP-glycosyltransferase 88A1-like [Glycine max]
Swissprot	tr\|Q9LK73\|U88A1_ARATH	3.00E-134	UDP-glycosyltransferase 88A1
trEMBL	tr\|I1L2Z1\|I1L2Z1_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA09G23750.1}

Sequence

Transcript Sequence

>Glyur000417s00031395.1
ATGGAAGAGGCACTAGTTATCTACCCAGCAGCTCTTGTAGGCCACATAGTCCCCTTTATAGAGCTATGCAAACACATACTCACTCACAAACCATCTCTATCCATTCACATCTTCCTCACCATAACCCCACGCTTCAACACCTCCGCCATTTCCCACTGCACAACCACCATTCCTTCCATCACCTTCCACTATCTCCCCAACCCCGTCACACCATCTTCCAATCCCAACCCTCTATTCGAGAACATTCACATCAACACTCAAAACCTCCACGAAGCCCTTCTCTCCATCTCCAAAACCCACACCATCAAAGCCCTCATCTTTGACTTGTTCTGTTTCCATTCACTCACCGTTGCATCCAAACTCAAAATCCCCGCTTATTGTTTCTTCACTTGTAGTGCTTCCGCACTTGCTTTGTTCCTTCACACTCCCACCATTCACAACAACACAGAAAAGAGCCTAATAGAACTCAACACTTGCATACACATCCCTGGTGTGCCACCAGTGCCTTCTAGAGACATGCCAGAACCAATGTTGGAACGTGGAAGCCAAATCTATGAAATCTTTCATCAATTCTCTCTCCTAATGCCTAAATTAGAAGGGGTTATTGTGAACACATTTGAAGCATTGGAACCAAGAAGTCTCAAAGCGATTTCTGATGGGTTGTGTGTACCCAATGGTCCAACACCCCCAATTTATTGTGTTGGGCCGTTGCTTGCATCTAACAAAGAAACAAAAACAGAACTTGATGAGTGTTTGAGTTGGCTGAACTCACAGCCTAGTAAAAGCGTTGTGTTTCTGTGTTTTGGGAGTATGGGTGTGTTCAGCATAGAGCAGCTTTACGAAATGGCAAATGGGTTGGAGAGAAGACAGAGTGAGAAACAGAACAATGACTCGTTTCGTTTGGACTCGTTGCTGCCAGAGGGGTTTTTGGATAGGACAAGGGATAGGGGTTTGGTGGTGAAGGATTGGGCACCCCAAGTGGAGGTGTTGAACCATGACTCAGTGGGTGGGTTTGTGACTCACTGTGGGTGGAACTCGGTGCTCGAGGCGGTGTGTGCTGGGGTGCCAATGGTTGGGTGGCCACTCTACGCGGAGCAGAGGTTCAATAGAGTGGTGTTGGTGAAGGAAATGGGGGTTGCATTATGGATGCGTGAGTCTAATGAGTCTGGCTTCGTTACCGCGAGTGAGGTGGAGGAACGAGTTAGGGAGTTGATGGAATCAGAGACGAGTGAGTTGATTAGGGAGCGAGTCATGGTTGCCAAGGATAAAGCTAAGGCTACATCATTGACTAAAGGTGGGTCTTCCATTGTTGCATTAACCAAACTGATACAGTCATGGGAAAGTTAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00417	167430	169681	-

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GT1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0008152 metabolic process

molecular_function
GO:0016758 transferase activity, transferring hexosyl groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000417s00031395.1	PF00201.13	UDPGT	105	394	6.30E-25

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.346
SRR1783600	control	0.270
SRR1783602	moderate drought stress	0.042
SRR1811619	moderate drought stress	0.099

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.040
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	35.080
DRR006526	Leaf Summer glycyrrhizin high producing strain	34.034

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.209
SRR2868004	Drought Stress (root)	0.082
SRR2967015	Control (root)	0.235

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	7.981
SRR9715740	Leaf	8.145
SRR9715741	Leaf	4.130
SRR9715739	Root	0.000
SRR9715742	Root	0.867
SRR9715743	Root	0.585

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.019

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.666
SRR8400027	Control - Root	0.615