Gene detail

Gene detail information of Glyur000417s00031387

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G16520.3	2.00E-97	UDP-glucosyl transferase 88A1
NR	XP_003548145.1	1.96E-175	PREDICTED: UDP-glycosyltransferase 88A1-like [Glycine max]
COG	YP_001104121.1	9.00E-06	antibiotic resistance macrolide glycosyltransferase [Saccharopolyspora erythraea NRRL 2338]
Swissprot	tr\|Q4R1I9\|ANGLT_ROSHC	2.00E-134	Anthocyanidin 5,3-O-glucosyltransferase
trEMBL	tr\|I1MPF4\|I1MPF4_SOYBN	7.00E-176	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA16G29430.1}

Sequence

Transcript Sequence

>Glyur000417s00031387.1
CCCCATTCCATACATGGAGGAGGCACTAGTTTTCTACTCCTCTCCTCTTGTNGGCCACCTATCCCCCATGATAGAGCTATGCAAGCACATACTCACTCACAAACCATCCCTATCATTTCACATCTTCCTCACCACCACCCCACACTTCACCACCTCCACCTTTTCCCACTATACAACCACCATCTCCTCATCCACTCCCTGCATCACCTTCCACAATCTCCCCACCCTCACAACCCCATCTCTCTCGCCCACACTTGACCCTTTAACCCACTTGGTGGAAATCCTTATCCTCAACACCCAAAACCTCCACCAAGCCCTTCTTTCCCTCTCCAAAACCCAAACCATCAAAGCCCTCATCTTGGACTTGTTCTGCTTCCATGCACTCACACTTGTACCCAAACTCATCAAAATCCCAACTTTTTGCTTCTTCACCAATAGTGGTTCCTCACTCGCTTTCTTCTTTTACTTACCCACATTTCACAACACCAATGACAAAAGCTTNAGTGAACTCAACACTAACATTGACATGCCTGGCCTTCCACCAATGCCTTCTAAGGACATGCCAGANCTTTTATCGGATCGTGGAAGCCAATCCTATGAGATCTTTCTGCAATTCTCTCTCCTAATGCAAAATTCAGCAGGGGTTATTGTGAACACATTTGAAGCATTGGAATCAAGAAGCCTCAAAGCAGTTGCTGATGGGTTGTGTATACCCAATGGTCCAACACCCCCAATTTATTGTGTTGGGCCATTGGTTGCATCAAACACTAAAGAAACAAAAACAGAAGTTGAGTGTTTGAGTTGGTTGAACTTGCAGCCNAGTAAAAGTGTTGTGTTTCTCTGTTTTGGGAGTATGGGTGTGTTCAGCAGAGAACAGCTTTGTGAAATGGCTTATGGNTTAGAGAAAAGTGGCCAAAGGACAAGAGATAGGGGTTTGGTGGTGAAGGATTGGGCACCACAAGTGGCAGTGTTGAACCATGACTCAGTGGGTGGGTTCGTGACTCACTGCGGGTGGAACTCGGTGCTTGAAGCTATGTGTGCTGGGGTGCCAATGGTTGCATGGCCACTCTACGCAGAGCAGAGGTTCAACAGAGTGGTGTTGGTGAAGGAAATGGGGGCTGCATTGTGGATGCATGAGTCTAATGAGTTTGGCTTCGTTGCGGCGAGTGAGGTGGAGGAACGAGTCAGAGAGTTGATGGAATCGGAGAAGGGTGAGTTGGTTAGGAAGCGAGTCACGGTTGTCAAGGATAAAGCCAAGGCTTCATTATTGACCGATGGCGGGTCTTCCACTGTTGCGTTAACCAAACTTGTTCAATCATGGGAAAGTTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00417	131493	133547	-

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GT1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0008152 metabolic process

molecular_function
GO:0016758 transferase activity, transferring hexosyl groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000417s00031387.1	PF00201.13	UDPGT	255	396	3.30E-23

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	32.996
SRR1783600	control	36.385
SRR1783602	moderate drought stress	2.900
SRR1811619	moderate drought stress	3.653

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.402
DRR006520	Root Summer glycyrrhizin high producing strain	0.525
DRR006521	Root Winter glycyrrhizin high producing strain	0.041
DRR006522	Root Winter glycyrrhizin high producing strain	0.081
DRR006523	Root Summer glycyrrhizin low producing strain	8.630
DRR006524	Root Summer glycyrrhizin low producing strain	8.487
DRR006525	Leaf Summer glycyrrhizin high producing strain	7.690
DRR006526	Leaf Summer glycyrrhizin high producing strain	7.486

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	3.769
SRR2868004	Drought Stress (root)	5.916
SRR2967015	Control (root)	0.930

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	7.002
SRR9715740	Leaf	10.202
SRR9715741	Leaf	6.528
SRR9715739	Root	35.859
SRR9715742	Root	18.033
SRR9715743	Root	20.696

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.053
SRR8749028	MeJA induced 9h	0.003
SRR8749029	MeJA induced 9h	0.147
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.004

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	30.424
SRR8400027	Control - Root	23.313