Gene detail information of Glyur000416s00028513 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G17455.2 | 4.00E-39 | ELF4-like 4 |
| NR | XP_004513473.1 | 6.48E-68 | PREDICTED: protein ELF4-LIKE 4-like [Cicer arietinum] |
| Swissprot | tr|Q570U6|EF4L4_ARATH | 3.00E-49 | Protein ELF4-LIKE 4 |
| trEMBL | tr|I3TAT7|I3TAT7_MEDTR | 4.00E-68 | Uncharacterized protein {ECO:0000313|EMBL:AFK49629.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00416 | 150727 | 151074 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000416s00028513.1 | PF07011.6 | DUF1313 | 14 | 99 | 1.10E-42 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.636 |
| SRR1783600 | control | 4.089 |
| SRR1783602 | moderate drought stress | 5.792 |
| SRR1811619 | moderate drought stress | 6.538 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.127 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.585 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.254 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.944 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.409 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.123 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.609 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.985 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.825 |
| SRR2868004 | Drought Stress (root) | 10.837 |
| SRR2967015 | Control (root) | 11.106 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 32.120 |
| SRR9715740 | Leaf | 31.197 |
| SRR9715741 | Leaf | 30.889 |
| SRR9715739 | Root | 4.710 |
| SRR9715742 | Root | 5.852 |
| SRR9715743 | Root | 4.005 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.003 |
| SRR8749028 | MeJA induced 9h | 1.643 |
| SRR8749029 | MeJA induced 9h | 4.433 |
| SRR8749030 | Uninduced | 2.774 |
| SRR8749031 | Uninduced | 2.149 |
| SRR8749032 | Uninduced | 5.253 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 17.792 |
| SRR8400027 | Control - Root | 18.961 |