Gene detail information of Glyur000415s00025771 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G53900.2 | 8.00E-123 | Serine/threonine-protein kinase WNK (With No Lysine)-related |
| NR | XP_006594754.1 | 0 | PREDICTED: uncharacterized protein LOC100814723 isoform X1 [Glycine max] |
| Swissprot | tr|P0C7P8|LHWL1_ARATH | 1.00E-20 | Transcription factor EMB1444 |
| trEMBL | tr|I1M358|I1M358_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G34980.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00415 | 78324 | 81365 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000415s00025771.1 | PF14215.1 | bHLH-MYC_N | 19 | 187 | 1.40E-30 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 22.524 |
| SRR1783600 | control | 22.959 |
| SRR1783602 | moderate drought stress | 32.492 |
| SRR1811619 | moderate drought stress | 32.371 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 20.954 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 20.193 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.010 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.063 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 24.548 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 23.849 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.274 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.226 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 52.285 |
| SRR2868004 | Drought Stress (root) | 37.967 |
| SRR2967015 | Control (root) | 45.876 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 11.286 |
| SRR9715740 | Leaf | 10.904 |
| SRR9715741 | Leaf | 14.583 |
| SRR9715739 | Root | 14.647 |
| SRR9715742 | Root | 12.065 |
| SRR9715743 | Root | 11.632 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 43.378 |
| SRR8749028 | MeJA induced 9h | 42.834 |
| SRR8749029 | MeJA induced 9h | 31.716 |
| SRR8749030 | Uninduced | 20.422 |
| SRR8749031 | Uninduced | 8.128 |
| SRR8749032 | Uninduced | 11.852 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 50.355 |
| SRR8400027 | Control - Root | 51.117 |