Gene detail information of Glyur000415s00025761.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G15210.1 | 2.00E-12 | ethylene responsive element binding factor 4 |
| NR | KEH38683.1 | 1.23E-83 | AP2 domain class transcription factor [Medicago truncatula] |
| Swissprot | tr|Q9LW49|ERF4_NICSY | 4.00E-34 | Ethylene-responsive transcription factor 4 |
| trEMBL | tr|A0A072VB55|A0A072VB55_MEDTR | 5.00E-84 | AP2 domain class transcription factor {ECO:0000313|EMBL:KEH38683.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00415 | 7420 | 9889 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | ERF |
| EAR motif-containing Proteins | ERF |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000415s00025761.1 | PF00847.15 | AP2 | 26 | 66 | 1.70E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 124.314 |
| SRR1783600 | control | 127.870 |
| SRR1783602 | moderate drought stress | 73.459 |
| SRR1811619 | moderate drought stress | 74.371 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 347.927 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 353.018 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 66.782 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 67.701 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 519.719 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 532.865 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 135.031 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 135.558 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 42.080 |
| SRR2868004 | Drought Stress (root) | 92.692 |
| SRR2967015 | Control (root) | 262.558 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 413.022 |
| SRR9715740 | Leaf | 418.081 |
| SRR9715741 | Leaf | 345.466 |
| SRR9715739 | Root | 995.227 |
| SRR9715742 | Root | 848.884 |
| SRR9715743 | Root | 847.973 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 97.066 |
| SRR8749028 | MeJA induced 9h | 119.624 |
| SRR8749029 | MeJA induced 9h | 49.577 |
| SRR8749030 | Uninduced | 43.714 |
| SRR8749031 | Uninduced | 38.427 |
| SRR8749032 | Uninduced | 123.368 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 109.971 |
| SRR8400027 | Control - Root | 142.440 |