Gene detail information of Glyur000414s00030177 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G24750.1 | 3.00E-25 | UDP-Glycosyltransferase superfamily protein |
| NR | KEH37637.1 | 1.12E-45 | sterol glucosyltransferase-like protein [Medicago truncatula] |
| COG | YP_007058021.1 | 1.00E-10 | UDP-glucuronosyltransferase [Rivularia sp. PCC 7116] |
| Swissprot | tr|Q9M8Z7|U80A2_ARATH | 2.00E-08 | Sterol 3-beta-glucosyltransferase UGT80A2 |
| trEMBL | tr|A0A072V719|A0A072V719_MEDTR | 4.00E-46 | Sterol glucosyltransferase-like protein {ECO:0000313|EMBL:KEH37637.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00414 | 118574 | 123479 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000414s00030177.1 | PF02892.10 | zf-BED | 205 | 241 | 6.00E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.430 |
| SRR1783600 | control | 4.523 |
| SRR1783602 | moderate drought stress | 6.295 |
| SRR1811619 | moderate drought stress | 5.765 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.031 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.584 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.107 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.088 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.335 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.146 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.754 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.795 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.720 |
| SRR2868004 | Drought Stress (root) | 4.300 |
| SRR2967015 | Control (root) | 3.936 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.606 |
| SRR9715740 | Leaf | 2.919 |
| SRR9715741 | Leaf | 3.609 |
| SRR9715739 | Root | 0.496 |
| SRR9715742 | Root | 2.192 |
| SRR9715743 | Root | 1.637 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.455 |
| SRR8749028 | MeJA induced 9h | 3.176 |
| SRR8749029 | MeJA induced 9h | 4.284 |
| SRR8749030 | Uninduced | 4.434 |
| SRR8749031 | Uninduced | 3.866 |
| SRR8749032 | Uninduced | 4.496 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.580 |
| SRR8400027 | Control - Root | 3.834 |