Gene detail information of Glyur000413s00015468 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G34640.1 | 7.00E-159 | plastid transcriptionally active 12 |
| NR | XP_003593873.1 | 0 | hypothetical protein MTR_2g018740 [Medicago truncatula] |
| trEMBL | tr|G7IP39|G7IP39_MEDTR | 0 | Plastid transcriptionally active protein {ECO:0000313|EMBL:AES64124.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00413 | 62024 | 67910 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 28.332 |
| SRR1783600 | control | 28.462 |
| SRR1783602 | moderate drought stress | 29.495 |
| SRR1811619 | moderate drought stress | 29.239 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 29.726 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 29.596 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 13.183 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 12.737 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 26.994 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 26.590 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 22.251 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 22.147 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 16.907 |
| SRR2868004 | Drought Stress (root) | 13.996 |
| SRR2967015 | Control (root) | 15.189 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 34.997 |
| SRR9715740 | Leaf | 57.641 |
| SRR9715741 | Leaf | 35.228 |
| SRR9715739 | Root | 5.589 |
| SRR9715742 | Root | 18.908 |
| SRR9715743 | Root | 17.067 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 17.177 |
| SRR8749028 | MeJA induced 9h | 14.308 |
| SRR8749029 | MeJA induced 9h | 9.664 |
| SRR8749030 | Uninduced | 4.320 |
| SRR8749031 | Uninduced | 1.961 |
| SRR8749032 | Uninduced | 2.257 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 36.449 |
| SRR8400027 | Control - Root | 35.633 |