Gene detail

Gene detail information of Glyur000413s00015455

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G62100.2	2.00E-50	BCL-2-associated athanogene 2
NR	XP_004485986.1	1.43E-146	PREDICTED: BAG family molecular chaperone regulator 3-like [Cicer arietinum]
Swissprot	tr\|Q0WPX7\|BAG2_ARATH	2.00E-62	BAG family molecular chaperone regulator 2
trEMBL	tr\|I1MF08\|I1MF08_SOYBN	6.00E-144	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA15G09850.1}

Sequence

Transcript Sequence

>Glyur000413s00015455.1
ATAATGCATAATGTTTACCCCCCTTTCTATTTTTCAGGGAGATTAAATTGCCATTATATGAAACGAGACACACAACTTCAANCAAACTTTACAAGCTGTTTTTGTCGGCAGAGTAAGTGGTCAGTGCTCATTCACTCTCGTGTCATGACTTAAATATTTACCTCTCGTTGGAGAAAAAACAGTCTCCACTGGCTGCTGAGTTCAAAATGATGAAGAAGGAACTGAACACGTACGGTGGAACTAAAACGAAGGAGACGACGTCGTTGGGAGAAGAAGAAGAAGAAGAGACGGAGTGGGAAATGAGACCCGGAGGAATGTTGGTACAGAAAAGGAGCACGAAACCGGATGCTCCGGTTCGCAATTTGCGCCTTCGAATCGCCTACGGTGCGCTACGCTACGAGATCTCCGTCAGTTCCACCGCCACATTCGGGGAGGTGAAGAAGAGAATGAGCGGGGAAACAGGGCTAGAGGCAGATGAACAGAGAGTGGTGTACAGAGGGAAAGAGCGAGAGAATGGAGAGTACTTGGATTTGTGCGGAGTGAAAGAGGGGTCGAAATTGGTGGTGATTCAAGACCCTTCCAGCATTGAGAGACGCTTCATCCAGATGCGTATCAATGCCAAGATCCAGAGTGCAAATCGTGCCATCAACAATGTCTCCCTCCAACTTGATCAGCTGGAAGACCAGGTCTCTGCAATTGAAAAGTCTGTTTCCAACGGAGTCAAAGTGCCAGAAGTTCAAATCACAACACTGATTGAGATGCTTATGAGACAAGCAATCAAATTAGAAAGCATTTCGGCAGAAGGGGATGCTTCTGTACAGAAAAATTTGCAGGGAAAGAGAGTGCAGAAATGTGTTGAAACTNTGGATATACTAAAGGTATCGAATGCAAGAGTAAAGCCTGTTGTTGTTACAACCAAGTGGGAGACCTTTGATCATCATCCATCCCCGTCCAAGTGGGAATTATTCGATTGAGTTTGCCCATCCCNTCCTATTCCTTTGTTTATACGGATTTAGCTTCTTATTTCTGAACTCTGCCCATGTCTTTCTATGATACTAGATAACTAAATTTTTGTGGAAAAAAAAATACTTGTACCTTG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00413	21276	23649	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function

GO:0005515 protein binding

GO:0051087 chaperone binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000413s00015455.1	PF00240.18	ubiquitin	64	122	1.50E-08
Glyur000413s00015455.1	PF02179.11	BAG	147	221	5.20E-06

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	9.945
SRR1783600	control	9.902
SRR1783602	moderate drought stress	12.523
SRR1811619	moderate drought stress	12.443

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	8.978
DRR006520	Root Summer glycyrrhizin high producing strain	8.708
DRR006521	Root Winter glycyrrhizin high producing strain	0.439
DRR006522	Root Winter glycyrrhizin high producing strain	0.364
DRR006523	Root Summer glycyrrhizin low producing strain	5.422
DRR006524	Root Summer glycyrrhizin low producing strain	5.072
DRR006525	Leaf Summer glycyrrhizin high producing strain	24.532
DRR006526	Leaf Summer glycyrrhizin high producing strain	24.683

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	25.501
SRR2868004	Drought Stress (root)	22.298
SRR2967015	Control (root)	23.304

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	59.792
SRR9715740	Leaf	40.871
SRR9715741	Leaf	50.327
SRR9715739	Root	2.862
SRR9715742	Root	18.297
SRR9715743	Root	15.975

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	30.454
SRR8749028	MeJA induced 9h	39.146
SRR8749029	MeJA induced 9h	19.433
SRR8749030	Uninduced	14.047
SRR8749031	Uninduced	15.439
SRR8749032	Uninduced	9.943

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	23.602
SRR8400027	Control - Root	28.423