Gene detail information of Glyur000413s00015454 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G03620.1 | 9.00E-64 | myosin heavy chain-related |
| NR | KEH36692.1 | 5.23E-159 | myosin heavy chain-like protein, putative [Medicago truncatula] |
| trEMBL | tr|A0A072V4D5|A0A072V4D5_MEDTR | 2.00E-159 | Myosin heavy chain-like protein, putative {ECO:0000313|EMBL:KEH36692.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00413 | 5783 | 7331 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.640 |
| SRR1783600 | control | 2.699 |
| SRR1783602 | moderate drought stress | 2.360 |
| SRR1811619 | moderate drought stress | 2.372 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.662 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.654 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.935 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.910 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.456 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.274 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.070 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.070 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.021 |
| SRR2868004 | Drought Stress (root) | 4.434 |
| SRR2967015 | Control (root) | 4.506 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.137 |
| SRR9715740 | Leaf | 0.362 |
| SRR9715741 | Leaf | 0.620 |
| SRR9715739 | Root | 0.373 |
| SRR9715742 | Root | 0.742 |
| SRR9715743 | Root | 0.449 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.662 |
| SRR8749028 | MeJA induced 9h | 16.984 |
| SRR8749029 | MeJA induced 9h | 11.412 |
| SRR8749030 | Uninduced | 6.803 |
| SRR8749031 | Uninduced | 5.566 |
| SRR8749032 | Uninduced | 7.915 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.087 |
| SRR8400027 | Control - Root | 7.662 |