Gene detail information of Glyur000412s00023306 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G15520.1 | 2.00E-58 | pleiotropic drug resistance 12 |
| NR | XP_003528365.1 | 6.17E-99 | PREDICTED: pleiotropic drug resistance protein 1-like [Glycine max] |
| Swissprot | tr|Q76CU2|PDR1_TOBAC | 4.00E-82 | Pleiotropic drug resistance protein 1 |
| trEMBL | tr|I1KH54|I1KH54_SOYBN | 2.00E-99 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G03780.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00412 | 132381 | 133460 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000412s00023306.1 | PF14510.1 | ABC_trans_N | 83 | 136 | 9.50E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.184 |
| SRR1783600 | control | 0.177 |
| SRR1783602 | moderate drought stress | 1.082 |
| SRR1811619 | moderate drought stress | 0.995 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.040 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.660 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.160 |
| SRR2967015 | Control (root) | 0.165 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.120 |
| SRR9715740 | Leaf | 3.605 |
| SRR9715741 | Leaf | 3.476 |
| SRR9715739 | Root | 0.171 |
| SRR9715742 | Root | 0.332 |
| SRR9715743 | Root | 1.203 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.631 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.098 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.193 |
| SRR8749032 | Uninduced | 0.092 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.149 |
| SRR8400027 | Control - Root | 6.659 |