Gene detail information of Glyur000412s00023300 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G23885.1 | 1.00E-10 | |
| NR | AFK36049.1 | 3.31E-33 | unknown [Lotus japonicus] |
| trEMBL | tr|I1LG83|I1LG83_SOYBN | 7.00E-37 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G02000.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00412 | 111617 | 112508 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.706 |
| SRR1783600 | control | 2.708 |
| SRR1783602 | moderate drought stress | 2.849 |
| SRR1811619 | moderate drought stress | 3.342 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.066 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.036 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.303 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.439 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.788 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.412 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.569 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.222 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 19.981 |
| SRR2868004 | Drought Stress (root) | 11.485 |
| SRR2967015 | Control (root) | 16.416 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.368 |
| SRR9715740 | Leaf | 5.404 |
| SRR9715741 | Leaf | 3.607 |
| SRR9715739 | Root | 2.119 |
| SRR9715742 | Root | 8.264 |
| SRR9715743 | Root | 1.274 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.300 |
| SRR8749028 | MeJA induced 9h | 0.540 |
| SRR8749029 | MeJA induced 9h | 1.506 |
| SRR8749030 | Uninduced | 0.183 |
| SRR8749031 | Uninduced | 0.773 |
| SRR8749032 | Uninduced | 7.205 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.869 |
| SRR8400027 | Control - Root | 7.987 |