Gene detail information of Glyur000412s00023295 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G15550.1 | 1.00E-165 | |
| NR | XP_006597137.1 | 0 | PREDICTED: trichohyalin-like [Glycine max] |
| trEMBL | tr|K7M8W3|K7M8W3_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G01446.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00412 | 88452 | 91292 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.740 |
| SRR1783600 | control | 1.731 |
| SRR1783602 | moderate drought stress | 1.312 |
| SRR1811619 | moderate drought stress | 1.332 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.353 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.329 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.603 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.694 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.612 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.686 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.755 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.668 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.493 |
| SRR2868004 | Drought Stress (root) | 1.641 |
| SRR2967015 | Control (root) | 3.481 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.687 |
| SRR9715740 | Leaf | 0.600 |
| SRR9715741 | Leaf | 0.693 |
| SRR9715739 | Root | 0.045 |
| SRR9715742 | Root | 0.533 |
| SRR9715743 | Root | 0.605 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.626 |
| SRR8749028 | MeJA induced 9h | 7.980 |
| SRR8749029 | MeJA induced 9h | 6.168 |
| SRR8749030 | Uninduced | 1.795 |
| SRR8749031 | Uninduced | 1.731 |
| SRR8749032 | Uninduced | 1.134 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.847 |
| SRR8400027 | Control - Root | 5.065 |