Gene detail

Gene detail information of Glyur000412s00023292

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G80300.1	0	nucleotide transporter 1
NR	KEH28732.1	0	plastidic ATP/ADP-transporter-like protein [Medicago truncatula]
COG	YP_004670874.1	1.00E-144	ADP,ATP carrier protein 1 [Simkania negevensis Z]
Swissprot	tr\|O24381\|TLC1_SOLTU	0	Plastidic ATP/ADP-transporter
trEMBL	tr\|A0A072UGB8\|A0A072UGB8_MEDTR	0	Plastidic ATP/ADP-transporter-like protein {ECO:0000313\|EMBL:KEH28732.1}

Sequence

Transcript Sequence

>Glyur000412s00023292.1
GATTCTTCTTGAGCCACCTTATCGCTCTCTCCCTTCATCACCNTCCTCTCTTGTTTAGGTTCTCCTCTTGGAAGTGCCATAATTCTTTGGTCTTTTTCTTGAAGGAAATCTCAAGAGAGAGAGGGTGGAGGGACATGGAGGCTGTTCTTCAGACCAGAGGGCTTCTCTCTCTCCCTACAAACCCTAGGAACAGGGTTTTGCACCCATCCCATGGCTTAAAGCAAAGGTTTTTNTCACTCAAACCCAAAACCCTTGATGGGTTTTCTCTAACCACAAGTGGGTTCTCAAAAATCCATGCTTTTTCACCAAAAGCCAATAACTTTGTCCAAAAGGACAAGAATTTGTTCCTCTGTAAGGCTGAAGCAGCTGCTGCTGCTGCTGATGGGAAACCAGTGTTTGGTGGTGAAGAAATTGATGAGAAACCAAGGTTCTTGGGTGTTGAGATTGCTACCCTAAAGAAGATTATACCTTTGGGGATGATGTTCTTTTGCATCCTCTTCAACTACACAATCCTAAGGGACACCAAGGATGTTCTTGTTGTGACAGCAAGGGGAAGCAGTGCTGAGATCATACCTTTNCTNAAGACATNGGTGAANCTTCCCATGGCTATTGGGTTCATGTTGTTGTACACAAAGTTGGCCAATGTTTTGTCCAAACAAGCCCTTTTCTACACTGTGATTCTACCTTTCATTGCTTTCTTNGGGGCNTTTGGGTTTGTTTTGTACCCTCTCAGCAACTATATCCACCCTGAGGCCTTTGCNGATAAGCTTCTCAATATCCTTGGCCCNAGGTTCCTTGGTCCACTTGCAATTATGAGGATATGGAGCTTCTGTTTGTTCTATGTCATGGCTGAATTGTGGGGGAGTGTGGTCATTTCTGTGCTGTTTTGGGGTTTTGCTAATCAGATAACTACTGTTGATGAAGCAAAACGATTCTACCCGCTGTTTGGACTTGGGGCCAATGTAGCCCTTATATTCTCTGGCCGGACAGTGAAATACTTTTCTAATCTGAGGCAGAATTTAGGTCCTGGAGTTGATGGTTGGGCCATCTCTCTCAAAGGAATGATGAGTATAGTTGTGCTTTTGGGGTTTGCAATCTGTTTCCTGTACTGGTGGGTGAATAGTTATGTCCCTCTTCCTACACGAAGCAAGAAGAAGAAGGAGAAGCCAAANATGGGAACAATGGAGAGCTTGAAGTTCTTGGTGTCTTCAAAGTACATCAGAGATCTTGCCACTTTAGTGGTTGCTTATGGAATTAGCATTAACCTTGTCGAAGTTACATGGAAGTCNAAGCTCAAAGCTCAGTTTCCTAGCCCCAATGAGTACTCTTCTTTTATGGGTGACTTCTCNACTGCAACTGGGATTGCCACATTCACAATGATGCTTCTAAGCCAATATATATTTGAAAAGTATGGATGGGGTACTGCTGCGAAGATCACACCTACNGTCCTGCTTCTGACAGGAGTTGGTTTCTTCTCTCTCATACTGTTCGGAGGTCCACTTGCACCTGGTCTTGCAAAGTTTGGAATGACTCCACTACTAGCGGCTGTATATGTTAAAGGGAAAGCAGCAATTGATGTTGTTTGCAACCCATTGGGGAAGTCTGGAGGAGCCCTCATCCAGCAATTTATGATCTTGTCTTTTGGGTCTCTAGCTAACTCAACCCCATACCTGGGAGGGGTGCTTCTGGTGATTGTACTTGCCTGGTTGGGAGCAGCCAAGTCGTTGGACACCCAGTTCACCACATTGCGTCGGGAGGAAGAACTCGAGAAAGAGATGGAAAGAGCAGCCGCCGTCAAGATACCNGTGGTGGCTGAGAATGCAAGTGGAAACGGTTCCCTTGCAAGTGGTTCACCTCTACCGGGTGGTGACTCCTCAAGTAGTCCATCCGAAGCCTCAACTCCTCGCAACATTTAAGAACAAAAGAACAAAACATGCTTCTTTCTGTGGAGAAATTGCCTTACAGAAAGAATAAGTAGAAAGAAAAGCCGTTGAGAGAGAGCAGTGTTAGGTGAGAAACTCTTTGTTTTTAGGTTATTTCCTAAGCTTACAGAATAAGCTTTTGCTACTTGCTTTTCTCAAGTCCCATAATTTTTTGTCTCCCATAGATAAGATGAGTTCTATTTACTTGTTACTATCAAGTTTTTACCAGTTTTGGTAAACCACATTTATTTTCCCTATAAAAGATTAGAACTTGTTTGTAATCTTTATCTTTATTTGTATCTAGTATTTTCTTGAATGGGTTGATCAGGACTTCGAGGGCTAGATTCTTAACACGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00412	72063	75916	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006810 transport

cellular_component
GO:0016021 integral component of membrane

molecular_function

GO:0005471 ATP:ADP antiporter activity

GO:0005524 ATP binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000412s00023292.1	PF03219.9	TLC	97	474	3.20E-144

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	332.750
SRR1783600	control	335.974
SRR1783602	moderate drought stress	373.796
SRR1811619	moderate drought stress	371.560

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	244.614
DRR006520	Root Summer glycyrrhizin high producing strain	240.734
DRR006521	Root Winter glycyrrhizin high producing strain	149.062
DRR006522	Root Winter glycyrrhizin high producing strain	145.995
DRR006523	Root Summer glycyrrhizin low producing strain	199.675
DRR006524	Root Summer glycyrrhizin low producing strain	200.874
DRR006525	Leaf Summer glycyrrhizin high producing strain	103.783
DRR006526	Leaf Summer glycyrrhizin high producing strain	103.467

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	75.302
SRR2868004	Drought Stress (root)	59.160
SRR2967015	Control (root)	77.562

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	38.738
SRR9715740	Leaf	50.007
SRR9715741	Leaf	36.761
SRR9715739	Root	473.796
SRR9715742	Root	264.633
SRR9715743	Root	292.777

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	42.152
SRR8749028	MeJA induced 9h	58.214
SRR8749029	MeJA induced 9h	32.036
SRR8749030	Uninduced	97.682
SRR8749031	Uninduced	107.284
SRR8749032	Uninduced	80.891

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	356.777
SRR8400027	Control - Root	350.488