Gene detail information of Glyur000412s00023289 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G15490.1 | 0 | alpha/beta-Hydrolases superfamily protein |
| NR | XP_004506889.1 | 0 | PREDICTED: uncharacterized protein LOC101501411 [Cicer arietinum] |
| COG | YP_004174602.1 | 5.00E-43 | hypothetical protein ANT_19760 [Anaerolinea thermophila UNI-1] |
| trEMBL | tr|A0A072UG54|A0A072UG54_MEDTR | 0 | Alpha/beta fold hydrolase {ECO:0000313|EMBL:KEH28729.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00412 | 30004 | 34945 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000412s00023289.1 | PF12697.2 | Abhydrolase_6 | 377 | 638 | 5.20E-36 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.766 |
| SRR1783600 | control | 7.884 |
| SRR1783602 | moderate drought stress | 7.987 |
| SRR1811619 | moderate drought stress | 8.045 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.518 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.447 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.364 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.205 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.699 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.084 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.977 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.901 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 24.238 |
| SRR2868004 | Drought Stress (root) | 21.606 |
| SRR2967015 | Control (root) | 22.078 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.780 |
| SRR9715740 | Leaf | 5.326 |
| SRR9715741 | Leaf | 4.014 |
| SRR9715739 | Root | 10.522 |
| SRR9715742 | Root | 13.924 |
| SRR9715743 | Root | 12.445 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 22.856 |
| SRR8749028 | MeJA induced 9h | 21.681 |
| SRR8749029 | MeJA induced 9h | 10.677 |
| SRR8749030 | Uninduced | 17.323 |
| SRR8749031 | Uninduced | 10.602 |
| SRR8749032 | Uninduced | 7.048 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 19.265 |
| SRR8400027 | Control - Root | 21.714 |