Gene detail information of Glyur000410s00016180 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G17310.1 | 1.00E-09 | |
| NR | NP_001236697.1 | 6.27E-38 | uncharacterized protein LOC100500605 [Glycine max] |
| trEMBL | tr|C6T287|C6T287_SOYBN | 2.00E-38 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G27240.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00410 | 17658 | 19096 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.059 |
| SRR1783600 | control | 10.353 |
| SRR1783602 | moderate drought stress | 9.441 |
| SRR1811619 | moderate drought stress | 9.834 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 13.008 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.389 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 14.193 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 13.463 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.923 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.420 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.203 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.042 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.232 |
| SRR2868004 | Drought Stress (root) | 8.741 |
| SRR2967015 | Control (root) | 7.735 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.521 |
| SRR9715740 | Leaf | 10.346 |
| SRR9715741 | Leaf | 7.699 |
| SRR9715739 | Root | 14.321 |
| SRR9715742 | Root | 8.179 |
| SRR9715743 | Root | 11.192 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.154 |
| SRR8749028 | MeJA induced 9h | 3.872 |
| SRR8749029 | MeJA induced 9h | 3.826 |
| SRR8749030 | Uninduced | 1.541 |
| SRR8749031 | Uninduced | 1.268 |
| SRR8749032 | Uninduced | 0.651 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.553 |
| SRR8400027 | Control - Root | 16.929 |