Gene detail information of Glyur000409s00019941 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G14965.1 | 1.00E-86 | membrane-associated progesterone binding protein 4 |
| NR | XP_004502079.1 | 6.64E-160 | PREDICTED: neuferricin-like [Cicer arietinum] |
| Swissprot | tr|Q2HIW2|MAPR4_ARATH | 3.00E-126 | Membrane-associated progesterone-binding protein 4 {ECO:0000303|Ref.6} |
| trEMBL | tr|V7BLP5|V7BLP5_PHAVU | 9.00E-155 | Uncharacterized protein {ECO:0000313|EMBL:ESW17965.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00409 | 98967 | 103528 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.432 |
| SRR1783600 | control | 7.660 |
| SRR1783602 | moderate drought stress | 5.739 |
| SRR1811619 | moderate drought stress | 5.781 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 13.132 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.217 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 16.755 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 16.583 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.660 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.909 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 14.019 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 14.556 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 32.053 |
| SRR2868004 | Drought Stress (root) | 34.069 |
| SRR2967015 | Control (root) | 29.037 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 15.156 |
| SRR9715740 | Leaf | 13.402 |
| SRR9715741 | Leaf | 14.172 |
| SRR9715739 | Root | 5.187 |
| SRR9715742 | Root | 8.166 |
| SRR9715743 | Root | 7.948 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 52.460 |
| SRR8749028 | MeJA induced 9h | 55.414 |
| SRR8749029 | MeJA induced 9h | 40.333 |
| SRR8749030 | Uninduced | 54.910 |
| SRR8749031 | Uninduced | 28.386 |
| SRR8749032 | Uninduced | 24.096 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 23.287 |
| SRR8400027 | Control - Root | 21.625 |