Gene detail information of Glyur000409s00019928 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G15140.1 | 1.00E-16 | |
| NR | AFK48023.1 | 1.41E-92 | unknown [Medicago truncatula] |
| trEMBL | tr|I3T681|I3T681_MEDTR | 5.00E-93 | Uncharacterized protein {ECO:0000313|EMBL:AFK48023.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00409 | 1541 | 6359 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.801 |
| SRR1783600 | control | 2.638 |
| SRR1783602 | moderate drought stress | 1.151 |
| SRR1811619 | moderate drought stress | 1.116 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.601 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.355 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.537 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.124 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.708 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.404 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.830 |
| SRR2868004 | Drought Stress (root) | 5.002 |
| SRR2967015 | Control (root) | 6.505 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.976 |
| SRR9715740 | Leaf | 0.280 |
| SRR9715741 | Leaf | 0.598 |
| SRR9715739 | Root | 0.396 |
| SRR9715742 | Root | 0.647 |
| SRR9715743 | Root | 0.096 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.696 |
| SRR8749028 | MeJA induced 9h | 3.344 |
| SRR8749029 | MeJA induced 9h | 3.212 |
| SRR8749030 | Uninduced | 0.009 |
| SRR8749031 | Uninduced | 0.151 |
| SRR8749032 | Uninduced | 0.158 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.641 |
| SRR8400027 | Control - Root | 6.715 |