Gene detail information of Glyur000408s00029658 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G44930.1 | 4.00E-29 | Plant protein of unknown function (DUF247) |
| NR | XP_007151799.1 | 1.36E-90 | hypothetical protein PHAVU_004G075800g [Phaseolus vulgaris] |
| trEMBL | tr|V7C344|V7C344_PHAVU | 5.00E-91 | Uncharacterized protein {ECO:0000313|EMBL:ESW23793.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00408 | 125203 | 126545 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000408s00029658.1 | PF03140.10 | DUF247 | 49 | 96 | 6.10E-10 |
| Glyur000408s00029658.1 | PF03140.10 | DUF247 | 103 | 156 | 2.40E-08 |
| Glyur000408s00029658.1 | PF03140.10 | DUF247 | 162 | 333 | 1.20E-48 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.530 |
| SRR1783600 | control | 9.041 |
| SRR1783602 | moderate drought stress | 9.842 |
| SRR1811619 | moderate drought stress | 9.874 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.963 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.869 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.197 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.240 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.186 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.070 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.405 |
| SRR2868004 | Drought Stress (root) | 1.579 |
| SRR2967015 | Control (root) | 1.018 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.063 |
| SRR9715740 | Leaf | 0.670 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 1.107 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.181 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.170 |
| SRR8749028 | MeJA induced 9h | 1.507 |
| SRR8749029 | MeJA induced 9h | 1.766 |
| SRR8749030 | Uninduced | 0.574 |
| SRR8749031 | Uninduced | 0.447 |
| SRR8749032 | Uninduced | 0.327 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.100 |
| SRR8400027 | Control - Root | 4.801 |