Gene detail information of Glyur000408s00029650 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G41050.1 | 2.00E-09 | PQ-loop repeat family protein / transmembrane family protein |
| NR | AES75135.2 | 3.43E-32 | PQ-loop protein/transmembrane family protein [Medicago truncatula] |
| trEMBL | tr|G7KP71|G7KP71_MEDTR | 1.00E-32 | PQ-loop protein/transmembrane family protein {ECO:0000313|EMBL:AES75135.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00408 | 32990 | 38436 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000408s00029650.1 | PF04193.9 | PQ-loop | 65 | 92 | 9.10E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.510 |
| SRR1783600 | control | 7.085 |
| SRR1783602 | moderate drought stress | 9.817 |
| SRR1811619 | moderate drought stress | 10.593 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.616 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.843 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.603 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.345 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.505 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.101 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.352 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.303 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.921 |
| SRR2868004 | Drought Stress (root) | 5.634 |
| SRR2967015 | Control (root) | 4.486 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.213 |
| SRR9715740 | Leaf | 0.171 |
| SRR9715741 | Leaf | 0.038 |
| SRR9715739 | Root | 0.782 |
| SRR9715742 | Root | 3.260 |
| SRR9715743 | Root | 2.702 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.006 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.244 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 22.290 |
| SRR8400027 | Control - Root | 32.305 |