Gene detail

Gene detail information of Glyur000407s00023572.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G24040.2	1.00E-78	Acyl-CoA N-acyltransferases (NAT) superfamily protein
NR	KDO82565.1	5.43E-106	hypothetical protein CISIN_1g021820mg [Citrus sinensis]
COG	YP_007099751.1	2.00E-07	acetyltransferase [Chamaesiphon minutus PCC 6605]
trEMBL	tr\|A0A067GV42\|A0A067GV42_CITSI	2.00E-106	Uncharacterized protein {ECO:0000313\|EMBL:KDO82565.1}

Sequence

Transcript Sequence

>Glyur000407s00023572.1
GGGGGTGGGGGTGGTGCTCACAAGTCACAAAAACACTGGTTCCATCCAAGGCCTCCCATCACACATCATCAACGGTGAACAGCAATGCCCTGTTCCTCCTCTTCTTATCAATATCATCATCAGTTCATCACCAAGCCCAGTTTGGTTATCCTTCTCTGATCTGGTAGATAGATAACATTAACATTGATTGCATCACCACTCCACTCCACTCCACTCCACTCCACCACCGACATCAGAAGTAAGCAAGTAAACACACTCGGTCTCCCTTTTCTACCCCACCATGGCCGCAACGCTTTCCCTCTCCTTCCCCTCCTTAGAAATTCAAAACCGCTTCTTCACCACCGCCACTCCCTCCAAAACGCGACCCTTCTATCCCTCAACTCCTCCCCTCCACAACAACCACAAATANTACCCACTCCCCAATAATCCCCACTTCAAAATCTCCTCTTCCTCTTCCTCCTCCTCCCACTCTTCTTCCCCTTCCCCCACCACACTCGACGCCGACCCGTTTTACCGGCCGGGCCGGTTCCTGACGAACGAGGAGCTCCAAAGGCTCNACTCCCTCGAGGGCTTCCTCTACTCACACGAGCTCGAGTCAGGGTCCGTGTGGGTCCGCGTCATGAGGGACGACGAGGTGGACCCCACGGTGCGCCTCCTCGCCGAGTCGTTCGCCGAGTCCATGATGTTCCCGTCGGGTTACGTCAACGTGCTGAGGTTCCTGGTGAAGCAGTACTTGATGGAGCGGAGGGCGCTGATGCCCCACATGGCCACTCTCGTCGGGTTTTACAGGGGAGTGGCGGCGGCGGAGGACGACGGTGAAGGTGGGAATGGAGAAGAGGTGCAGTTGGCGGGGACCGTGGAGGTTTGTTTTGACAAAAGGGGTGCCAATGCTTCTCTTCCCTCACCCACTCCCCCGAAGGATTCTCCTTACATTTGTAACATGGCCGTGCAAAAGTCTCTCAGAAGGAGGGGCATTGGCTGGCATCTTCTAAAGGCAAGTGAGGAACTGATTTCTCGGATGAGTTCATCACGGGAGGTTTACTTGCATTGCAGAATGATTGATGCAGCTCCATTTAACATGTATACAAAAGCAGATTACAAAATTGTCAAGACAGATAAGACGCAAGCACTTGATGTGCAAGAAACTTCCACTCATAACTATGCCTTCAGAAACAGATCTGAATGGTACGAAGATGATCATGGTGGTTTTAAGTTTGACTGGAGAATGGAGAGTGGTTTCAGTCAGGCATCCTTATTTATTTCTCTTAATCCAAGGGGAAAGGAAATTGCTCTTTCAGATTTGTCCACAGTGGACTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00407	117308	121275	-

Gene family

Gene family	subfamily
Transcription Factors Family	GNAT

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0008080 N-acetyltransferase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000407s00023572.1	PF00583.19	Acetyltransf_1	203	274	8.30E-07

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	7.982
SRR1783600	control	8.051
SRR1783602	moderate drought stress	19.012
SRR1811619	moderate drought stress	17.899

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	6.433
DRR006520	Root Summer glycyrrhizin high producing strain	5.799
DRR006521	Root Winter glycyrrhizin high producing strain	1.353
DRR006522	Root Winter glycyrrhizin high producing strain	1.701
DRR006523	Root Summer glycyrrhizin low producing strain	2.882
DRR006524	Root Summer glycyrrhizin low producing strain	2.661
DRR006525	Leaf Summer glycyrrhizin high producing strain	14.776
DRR006526	Leaf Summer glycyrrhizin high producing strain	13.482

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	7.779
SRR2868004	Drought Stress (root)	13.175
SRR2967015	Control (root)	15.934

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	13.802
SRR9715740	Leaf	15.059
SRR9715741	Leaf	12.617
SRR9715739	Root	5.091
SRR9715742	Root	7.765
SRR9715743	Root	7.172

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	8.503
SRR8749028	MeJA induced 9h	11.266
SRR8749029	MeJA induced 9h	3.862
SRR8749030	Uninduced	2.191
SRR8749031	Uninduced	1.259
SRR8749032	Uninduced	3.980

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	12.513
SRR8400027	Control - Root	9.907