Gene detail information of Glyur000407s00023570 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G24020.2 | 1.00E-37 | MLP-like protein 423 |
| NR | AFK40667.1 | 4.10E-79 | unknown [Lotus japonicus] |
| Swissprot | tr|Q93VR4|ML423_ARATH | 4.00E-49 | MLP-like protein 423 |
| trEMBL | tr|I3SK75|I3SK75_LOTJA | 2.00E-79 | Uncharacterized protein {ECO:0000313|EMBL:AFK40667.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00407 | 96754 | 108765 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000407s00023570.1 | PF00407.14 | Bet_v_1 | 3 | 137 | 2.40E-37 |
| Glyur000407s00023570.1 | PF00407.14 | Bet_v_1 | 138 | 273 | 7.30E-30 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 37.705 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 38.151 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.012 |
| SRR2868004 | Drought Stress (root) | 0.000 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 110.358 |
| SRR9715740 | Leaf | 16.156 |
| SRR9715741 | Leaf | 22.709 |
| SRR9715739 | Root | 15.311 |
| SRR9715742 | Root | 3.843 |
| SRR9715743 | Root | 5.786 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.138 |
| SRR8400027 | Control - Root | 4.913 |