Gene detail information of Glyur000407s00023566 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G60060.1 | 9.00E-123 | Serine/threonine-protein kinase WNK (With No Lysine)-related |
| NR | XP_007157477.1 | 0 | hypothetical protein PHAVU_002G072900g [Phaseolus vulgaris] |
| Swissprot | tr|Q9XIN0|LHW_ARATH | 1.00E-13 | Transcription factor LHW |
| trEMBL | tr|V7CKN3|V7CKN3_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW29471.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00407 | 57629 | 59752 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000407s00023566.1 | PF14215.1 | bHLH-MYC_N | 14 | 205 | 1.60E-36 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.123 |
| SRR1783600 | control | 0.139 |
| SRR1783602 | moderate drought stress | 0.289 |
| SRR1811619 | moderate drought stress | 0.288 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.598 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.636 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.092 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.093 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.559 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.560 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.463 |
| SRR2868004 | Drought Stress (root) | 1.947 |
| SRR2967015 | Control (root) | 1.792 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.699 |
| SRR9715740 | Leaf | 6.913 |
| SRR9715741 | Leaf | 13.005 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 1.009 |
| SRR9715743 | Root | 0.781 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.008 |
| SRR8749029 | MeJA induced 9h | 0.103 |
| SRR8749030 | Uninduced | 0.122 |
| SRR8749031 | Uninduced | 0.065 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.642 |
| SRR8400027 | Control - Root | 3.980 |