Gene detail

Gene detail information of Glyur000406s00019721

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G80030.3	5.00E-165	Molecular chaperone Hsp40/DnaJ family protein
NR	XP_004486655.1	0	PREDICTED: chaperone protein DnaJ-like isoform X1 [Cicer arietinum]
COG	NP_681579.1	5.00E-127	molecular chaperone DnaJ [Thermosynechococcus elongatus BP-1]
Swissprot	tr\|Q38813\|DNAJ1_ARATH	6.00E-50	Chaperone protein dnaJ 1, mitochondrial (Precursor)
trEMBL	tr\|P92424\|P92424_PEA	0	DnaJ homologue {ECO:0000313\|EMBL:CAA96305.1} (Precursor)

Sequence

Transcript Sequence

>Glyur000406s00019721.1
CAGGAGGCGAAGGGGTAAATTGATTGTAATGCATGATGCATCGTTGCTGAGGCAGCACCACAACTTATCTTGTGGTTATGGGTCCCACAAAGTCTCTTCCTTTCTCTCTGTCTAGTTTCTACCATCAATGCTTNTGCCCAGTAGTAGTAGTAGTAGTCCAGTGCCCCACCCCATAAACGCCGACCCCTTTTTTTTCATTAAAAGCACGCTTTTTTTGTTGTTCCCACAACAACAAATCACAATAGAAGAATTTCATCAAAAGTGGGTTAAATTAAAATTACAAAAAAAAAAAATCATGAACAAAAGCAATAGCGTTTTCCTGCACTTGCTGTAGTAGTTAAAAATCAATCAGGGTCATCATCTTCTTCACACATTCAGTTAGTTTGTTTCAATGGCAGTTACATCTCTTTCTCTGTTCCCACCCGCTTCTTCTACTCACTCTTGCTTCTGTGGTGGTGGGATCCATCTTCGTTCCCACAAGAACTTCCTCTCCATTCACTCTCCTTCTTCTTCTTCTTCTTCTTTTCCGTTTCCTTCTTCTCTCTCTTCAAATTCTTCTTCGAAGGTCTCTGGTAGAGGCAAACGCTTTCACACTGTCGTTGTCGCTGCTTCCGCTGACTATTATGCCACTCTCGGAGTTCCCAAATCCGCCACGGGAAAAGAAATCAAAGCCGCTTATCGAAGGTTAGCTCGTCAGTACCATCCTGATGTGAACAAGGAACCTGGTGCAACTGAAAAGTTCAAAGAGATTAGTGCTGCCTATGAGGTGCTATCAGATGACAAAAAGAGGGCTTTGTACGATCAATATGGTGAGGCAGGAGTTAAGAGTACAGTGGGAGGAGCATCAAGTGCCTATACGACGAATCCTTTTGATTTATTTGAAACATTTTTTGGGTCAAGTATGGGNGGGTTTGCTGGCATGGATCCAACTGGATTTGGAACACAACGTCGTAGCACTGTTACTAAGGGTGAAGACATCCGTNCTACTTCTACATATGAAAACATTACAATTTCCAAACTTTTTAATGAGAGTATGCTGTATATTGAGAAGATTTTTGATTCAAATGTCAACAGGTATGATTTCTCCTTGGAGTTTTCTGAGGCAATTTTTGGAACAGAGAAAGAATTCGAGCTTTCCCATTTAGAAACATGTGAAGTCTGTACTGGTACCGGTGCAAAGTTTGGCTCCAGGATGAGAGTATGTTCAACTTGTGGTGGGAGAGGTCAAGTGATGAGGACTGAACAAACACCTTTTGGGTTGTTCTCACAGGTCTCAATATGTCCAAGCTGTGGAGGGAATGGTGAAGTGATATCTGAATTTTGTCGTAAATGCAGTGGTGAAGGGCGCATACGGGTTAAGAAAAACATGAAAGTTAAAGTTCCTCCTGGGGTTAGCCCAGGCAGCATTTTAAGAGTTGCTGGGGAGGGTGATGCTGGACCAAGAGGGGGCCCTCCGGGAGATCTTTACGTATATCTTGATGTGGAAGAGATACCAGGAATTCAAAGAGATGACATTAATCTCCGCTCAACAGTATCAATCAGTTATCTTGATGCTATACTGGGGGCTGTAGTGAAGGTAAAGACAGTTGAAGGCACTTCTGAACTACAAATACCTTCGGGTACCCAACCTGGCGACATCCTTGTCCTTGCAAGGAAAGGTGTACCAAAACTAAACAAACCGTCAATACGTGGTGACCACTTATTTACAGTTAAAGTTACAATACCGAAACGTATTAGTGTGAATGAGCGCGAGTTGCTTGAAGAACTTGGTTCTCTAGGTGACAAAAGCAGTCGTTCAAGATCCCAACCTAAGACTCAATCTTCCACCGGAAGTATGGAAGGTTCTGCAGCTCGAAGGGCNGAAAATCCAACAGCAACAACAGTCACAGAAAAACCTGAAAAATCAGAAGACCAAAATGACTTATGGAATCAATTAAAGGGCTTTGCTGGGTCTGTGGCAAATGGAGCTCTAAAGTGGTTGAAAGATAATCTCTAGCCCAATGGGATTATATTAAGTGGTCAAGAATGTCTCCAGGATGTAGTTTNTCTAATTGGGACTAGAGAGTTGTAATGATTCAAACAGTTGCTGGAAAGGAAGGGACTATGCAGACATTTTCTTCAAATGCTTTAGCTGAAAATTGTTAGCTACGCAGCGAAATTGAAACAAGAAGTCATGCATATTCTTTCAAATTGTTTTTACTNGTAAATTTTGGCACGAGATAATTTATACAGAATAAGTTGTTGAAGGATCCTTTTTGCCCTCCATGAGCAGGTTGCACTAGAGAAAGCTAGTGGATATTTGATAGGAATTCTAAGCTCCATTTCAGTGAATTACCTAAAATTTAGTTGTTATATTAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00406	64945	73973	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0006457 protein folding

GO:0009408 response to heat

molecular_function

GO:0005524 ATP binding

GO:0031072 heat shock protein binding

GO:0051082 unfolded protein binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000406s00019721.1	PF00226.26	DnaJ	76	137	4.40E-27
Glyur000406s00019721.1	PF00684.14	DnaJ_CXXCXGXG	254	318	6.20E-14
Glyur000406s00019721.1	PF01556.13	CTDII	376	454	2.00E-19

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	9.070
SRR1783600	control	9.138
SRR1783602	moderate drought stress	8.880
SRR1811619	moderate drought stress	8.605

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	8.821
DRR006520	Root Summer glycyrrhizin high producing strain	8.673
DRR006521	Root Winter glycyrrhizin high producing strain	8.412
DRR006522	Root Winter glycyrrhizin high producing strain	7.952
DRR006523	Root Summer glycyrrhizin low producing strain	8.514
DRR006524	Root Summer glycyrrhizin low producing strain	8.519
DRR006525	Leaf Summer glycyrrhizin high producing strain	27.039
DRR006526	Leaf Summer glycyrrhizin high producing strain	26.504

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	13.604
SRR2868004	Drought Stress (root)	15.374
SRR2967015	Control (root)	15.112

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	33.895
SRR9715740	Leaf	50.017
SRR9715741	Leaf	32.306
SRR9715739	Root	1.006
SRR9715742	Root	5.773
SRR9715743	Root	6.182

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	11.452
SRR8749028	MeJA induced 9h	9.948
SRR8749029	MeJA induced 9h	7.274
SRR8749030	Uninduced	4.474
SRR8749031	Uninduced	1.646
SRR8749032	Uninduced	1.430

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	18.644
SRR8400027	Control - Root	18.333