Gene detail information of Glyur000406s00019720 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G15900.1 | 8.00E-11 | |
| NR | AFK40042.1 | 4.23E-42 | unknown [Lotus japonicus] |
| trEMBL | tr|I3SIF0|I3SIF0_LOTJA | 2.00E-42 | Uncharacterized protein {ECO:0000313|EMBL:AFK40042.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00406 | 63335 | 64486 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.975 |
| SRR1783600 | control | 3.042 |
| SRR1783602 | moderate drought stress | 4.062 |
| SRR1811619 | moderate drought stress | 4.174 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.511 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.883 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.257 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.541 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.915 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.531 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 29.615 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 29.219 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.585 |
| SRR2868004 | Drought Stress (root) | 3.821 |
| SRR2967015 | Control (root) | 2.662 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.746 |
| SRR9715740 | Leaf | 11.165 |
| SRR9715741 | Leaf | 8.444 |
| SRR9715739 | Root | 2.357 |
| SRR9715742 | Root | 2.989 |
| SRR9715743 | Root | 1.314 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.729 |
| SRR8749028 | MeJA induced 9h | 0.749 |
| SRR8749029 | MeJA induced 9h | 0.976 |
| SRR8749030 | Uninduced | 0.814 |
| SRR8749031 | Uninduced | 0.912 |
| SRR8749032 | Uninduced | 0.903 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.636 |
| SRR8400027 | Control - Root | 7.513 |