Gene detail

Gene detail information of Glyur000405s00021266

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G47820.2	0	P-loop containing nucleoside triphosphate hydrolases superfamily protein
NR	XP_004499035.1	0	PREDICTED: chromosome-associated kinesin KIF4-like isoform X1 [Cicer arietinum]
Swissprot	tr\|P46869\|FLA10_CHLRE	6.00E-74	Kinesin-like protein FLA10
trEMBL	tr\|V7CUB4\|V7CUB4_PHAVU	0	Kinesin-like protein {ECO:0000256\|RuleBase:RU000394}

Sequence

Transcript Sequence

>Glyur000405s00021266.1
GTTTGTTGTTGTCGTCCTTACAGTTACCTCATTCCTTCCTTCGACCCACCTTTGGTTCTGAAACCCCTTCTTTTTATTTCCACATCTACCCTTTCGCTTTCTCTCTCCTCCTCCNACTATAACTACTCTCTCTCCTCCTCCTGCTGTTACTGCAACCAATAACAATAACTTTGTCCCTCCGCACACAATGAGAAGAACCATTGTTTGTTGTGCGAGCTAATTGATTCTTCTTTCTTCTTCCCTTCACACTGTACCAAGCTTACTTTCTCTCTCTCTCACACACACACACACAAACACATTCACTCACATTGTGTGTGTATTGTTCTGTGAGTTTTTTTTTTTTGCTGCTTCGTGATGGAAGCAGGGGAAGATTGTTGCGTGAAGGTTGCGGTTCACGTTCGACCACTCATCAACGATGAGAAGGTTCAAGGATGCAAGGATTGTGTAACCGTCGTTTCAGGGAAGCCTCAGGTGCAAATTGGTGCCCATTCCTTTACATTTGATCATGTTTATGGGAGCACTGGTTCTCCCTCATCTTCCATGTTCAGCGAATGTGTTGCTTCCCTTGTTGATGGTTTGTTCCAAGGATATAATGCCACTGTTCTCGCATATGGTCAGACAGGTTCTGGGAAAACATACACGATGGGCACTGGCTTTAAAGATGGTTGCCAAGAAGGAATAGTACNCCAAGTTATGAGTGCCTTGTTTAGCAAAATTGAGACTTTAAAGCATCAGATTGAATTTCAGCTGCATGTTTCCTTTATCGAGATTCTTAAAGAAGAAGTAAGAGATTTGCTGGACCCATCCTCTATGAACAAACCAGATACTGCAAATGGACATGCAGGGAAAGTGACTAGTCCTGGTAAACCGCCTATACAAATTCGTGAGACATCAAATGGTGTCATTACCCTAGCAGGATCTACGGAAGTCAGTGTTACAACACTAAAAGAAATGGCTGCTTGCCTAGAACAAGGGTCATTGAGTAGAGCAACTGGGAGCACAAATATGAACAACCAATCCAGTCGTTCACATGCCATCTTCACCATCACATTAGAGCAAATGCGGAAGCTCAACAGTCCTAGTGAGATCAGTTTAAATGATACCATGAATGAAGAGTACCTTTGTGCCAAGTTACACCTAGTAGATCTTGCTGGATCAGAACGAGCTAAAAGAACAGGGTCTGATGGTCTGCGTTTTAAGGAAGGAGTTCACATTAACAAAGGCCTTCTAGCACTTGGCAATGTGATTAGTGCACTCGGTGATGAAAAGAAGAGAAAAGAAGGCGTTCATGTTCCTTACAGGGATAGTAAACTTACTAGGCTTTTGCAGGATTCACTTGGTGGTAACAGCAGAACTGTTATGATAGCCTGCATAAGTCCTGCTGATATTAATGCTGAGGAAACCCTTAACACTTTGAAGTACGCAAATCGTGCACGCAATATCCAAAATAAGCCTGTCGTCAATAGAGATCCAATGTCCAATGAGATGCTTAAAATGAGACAACAACTAGAGTATTTGCAAGCAGAACTTTGTGCTCGTTCTGGTGGCTCTTCCGAGGAAGTTCAGGTCCTCAAGGAAAGGATTGCTTGGCTTGAAACAGCTAATGAGGATCTTTGCCGTGAACTTCATGAATATCGTAGTAGATGTTCTGCTATAGTACAAAGTGAAAAGGACACTTATGATGGTAGTATGTGCAATGTAAAGACTGATGGGCTTAAAAGGGGCTTACCTATCACTGCCTCTGATTGTCCAATGAGTGAAGCAACGGGGGATTCAAGGGAAATCGAAGAAGTAGCAAAAGAGTGGGAGCATACACTTCTGCAAAATAGTATGGATAAAGAGTTACATGAATTGAATAAACGCTTGGAGCAGAAAGAGTCTGAGATGAAGCTCTTTGGAGTGTTGGANGCTGAAACACTCAAGCAGCACTTCGGAAGGAAGATAATGGAACTTGAGGATGAGAAGAGAGCTGTCCAGCAAGAGAGGGATCATCTTTTGGCTGAAGTTGAAAATCTTGCTGCCGGTTCTGACGGACAAACACAGAAATCAGAGGATATCCATGCCCAAAAATTAAAAGCACTTGAAGCCCAGATTCTGGATCTGAAGAAGAAACAGGAGAGCCAGGTCCAGCTTCTGAAGCAAAAGCAAAAAAGTGATGAAGCAGCGAAGCGTCTGCAAGATGAAATACAATCTATAAAAGCCCAAAAGGTTCAATTGCAACAAAGGATAAAACAAGAGGCGGAACAGTTTCGGCAGTGGAAGGCTTCTAGAGAGAAAGAGCTGCTGCAATTAAGGAANGAAGGAAGAAGAAATGAGTTTGAAAGGCATAAGCTGCAAGCTCTAAATCAGCGCCAGAAAATGGTCCTCCAGAGAAAGACTGAAGAAGCTGCAATGGCCACCAAGAAGTTAAAGGAGTTGTTAGAAGCTCGTAAATCTTCCAGCCGAGACACATCAGTTACAATGAATGGAAGTGGAACAAATGGACAGAGCAATGAGAAGTCCTTGCAACGGTGGCTTGATCACGAGCTAGAAGTCATGGTAAAAGAGCATGAAGTTCGTTTTGAATACGAGAAGCAGAGCCAAGTGCGGGCTGCTCTTGCAGAAGAGTTAGCCATGCTGAAACAAGTAAATGAGTNTGCTGCCAAGGGTCTCAGTCCTCCAAGAGGAAAGAATGGATTTGCTAGAGCATCCTCCATGTCGCTAAATGCAAGAATGGCTAGAATAGCTTCACTTGAGAACATGATGAGCATATCATCTAATTCACTTGTGGCAATGGCTTCTCAACTATCGGAGGCAGAAGAACGAGAACGGGCCTTCACTAATCGTGGACGCTGGAACCAGTTGCGCTCAATGGGAGAAGCCAAAAATTTGCTTCAATATATGTTTAATTCTGTTGGAGACACTAGGTGTCAGCTCTGGGAGAAGGACATGGAGATCAGAGAAATGAAAGATCAAATCAGAGAACTTGTAGGTCTATTACGGCAAAGTGAGATTAAGAGAAAGGAAGTTGAGAAGGAACTAAAAGTGAGAGAGCAAGCTGTTGCAACCACATTGGCCAAGCCAGCTTCTGNAAATTCTCCAAATTCATTGAAACACTACGCTGAAGACATCAAGGAACCTTTGTCTCCAGAGTCTGTGCCAGTACAGAAACAACGCAAATATACGCCAGGCGTTGCTAATGGCCAAGTGAGGGAATCAGCAGCATTTATAGATCAGAGTCGAAGGATGGTACCCATTGGGCAACTGNCAATGAAAAAACTAGCAATTGCAGGACAAGCTTCTGGCAAGCTATGGAGGTGGAAAAGAAGCCATCATCAATGGCTAGTACAATTCAAATGGAAGTGGCAGAAGCCGTGGAGACTTTCTGAGTGGATTCGACACAGTGATGAGACAGTCATGAGAGCAAGGCCACGCTCACAGGCTTTGCCGCATATCATGAGAATCTGA

Protein Sequence

>Glyur000405s00021266.1
MEAGEDCCVKVAVHVRPLINDEKVQGCKDCVTVVSGKPQVQIGAHSFTFDHVYGSTGSPSSSMFSECVASLVDGLFQGYNATVLAYGQTGSGKTYTMGTGFKDGCQEGIVXQVMSALFSKIETLKHQIEFQLHVSFIEILKEEVRDLLDPSSMNKPDTANGHAGKVTSPGKPPIQIRETSNGVITLAGSTEVSVTTLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLNSPSEISLNDTMNEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINKGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQNKPVVNRDPMSNEMLKMRQQLEYLQAELCARSGGSSEEVQVLKERIAWLETANEDLCRELHEYRSRCSAIVQSEKDTYDGSMCNVKTDGLKRGLPITASDCPMSEATGDSREIEEVAKEWEHTLLQNSMDKELHELNKRLEQKESEMKLFGVLXAETLKQHFGRKIMELEDEKRAVQQERDHLLAEVENLAAGSDGQTQKSEDIHAQKLKALEAQILDLKKKQESQVQLLKQKQKSDEAAKRLQDEIQSIKAQKVQLQQRIKQEAEQFRQWKASREKELLQLRXEGRRNEFERHKLQALNQRQKMVLQRKTEEAAMATKKLKELLEARKSSSRDTSVTMNGSGTNGQSNEKSLQRWLDHELEVMVKEHEVRFEYEKQSQVRAALAEELAMLKQVNEXAAKGLSPPRGKNGFARASSMSLNARMARIASLENMMSISSNSLVAMASQLSEAEERERAFTNRGRWNQLRSMGEAKNLLQYMFNSVGDTRCQLWEKDMEIREMKDQIRELVGLLRQSEIKRKEVEKELKVREQAVATTLAKPASXNSPNSLKHYAEDIKEPLSPESVPVQKQRKYTPGVANGQVRESAAFIDQSRRMVPIGQLXMKKLAIAGQASGKLWRWKRSHHQWLVQFKWKWQKPWRLSEWIRHSDETVMRARPRSQALPHIMRI

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00405	146000	157894	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0007018 microtubule-based movement

cellular_component
GO:0005871 kinesin complex

molecular_function

GO:0003777 microtubule motor activity

GO:0005524 ATP binding

GO:0008017 microtubule binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000405s00021266.1	PF00225.18	Kinesin	16	363	6.00E-103
Glyur000405s00021266.2	PF00225.18	Kinesin	16	363	8.50E-104

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	4.832
SRR1783600	control	5.247
SRR1783602	moderate drought stress	3.931
SRR1811619	moderate drought stress	3.655

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	5.466
DRR006520	Root Summer glycyrrhizin high producing strain	5.388
DRR006521	Root Winter glycyrrhizin high producing strain	0.898
DRR006522	Root Winter glycyrrhizin high producing strain	0.927
DRR006523	Root Summer glycyrrhizin low producing strain	4.941
DRR006524	Root Summer glycyrrhizin low producing strain	4.921
DRR006525	Leaf Summer glycyrrhizin high producing strain	4.166
DRR006526	Leaf Summer glycyrrhizin high producing strain	3.999

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	15.671
SRR2868004	Drought Stress (root)	11.131
SRR2967015	Control (root)	15.431

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	9.689
SRR9715740	Leaf	5.963
SRR9715741	Leaf	4.581
SRR9715739	Root	0.325
SRR9715742	Root	4.183
SRR9715743	Root	3.276

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	5.592
SRR8749028	MeJA induced 9h	5.794
SRR8749029	MeJA induced 9h	2.947
SRR8749030	Uninduced	0.556
SRR8749031	Uninduced	0.449
SRR8749032	Uninduced	0.377

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	13.876
SRR8400027	Control - Root	18.199