Gene detail information of Glyur000405s00021262 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G67190.1 | 2.00E-35 | DREB and EAR motif protein 2 |
| NR | AHI96435.1 | 1.81E-73 | DREB group protein [Ammopiptanthus mongolicus] |
| Swissprot | tr|Q8LC30|RAP21_ARATH | 3.00E-50 | Ethylene-responsive transcription factor RAP2-1 |
| trEMBL | tr|W6D834|W6D834_9FABA | 7.00E-74 | DREB group protein {ECO:0000313|EMBL:AHI96435.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00405 | 99557 | 100081 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | ERF |
| EAR motif-containing Proteins | ERF |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000405s00021262.1 | PF00847.15 | AP2 | 35 | 84 | 4.00E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 43.722 |
| SRR1783600 | control | 43.748 |
| SRR1783602 | moderate drought stress | 66.040 |
| SRR1811619 | moderate drought stress | 66.877 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 213.684 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 213.714 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1964.430 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1951.527 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 357.559 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 379.010 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 120.862 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 118.336 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 48.421 |
| SRR2868004 | Drought Stress (root) | 82.013 |
| SRR2967015 | Control (root) | 79.156 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 108.070 |
| SRR9715740 | Leaf | 205.883 |
| SRR9715741 | Leaf | 153.848 |
| SRR9715739 | Root | 27.439 |
| SRR9715742 | Root | 58.172 |
| SRR9715743 | Root | 50.118 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 15.961 |
| SRR8749028 | MeJA induced 9h | 69.706 |
| SRR8749029 | MeJA induced 9h | 23.346 |
| SRR8749030 | Uninduced | 35.850 |
| SRR8749031 | Uninduced | 56.362 |
| SRR8749032 | Uninduced | 45.738 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 43.507 |
| SRR8400027 | Control - Root | 34.654 |