Gene detail information of Glyur000405s00021260.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G46480.1 | 5.00E-61 | WUSCHEL related homeobox 4 |
| NR | XP_004499043.1 | 4.61E-122 | PREDICTED: WUSCHEL-related homeobox 4-like [Cicer arietinum] |
| Swissprot | tr|Q6X7J9|WOX4_ARATH | 8.00E-75 | WUSCHEL-related homeobox 4 |
| trEMBL | tr|V7CU02|V7CU02_PHAVU | 5.00E-119 | Uncharacterized protein {ECO:0000313|EMBL:ESW32863.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00405 | 81256 | 83346 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | HB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000405s00021260.1 | PF00046.24 | Homeobox | 90 | 149 | 1.20E-18 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 25.786 |
| SRR1783600 | control | 25.895 |
| SRR1783602 | moderate drought stress | 33.918 |
| SRR1811619 | moderate drought stress | 33.567 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 34.561 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 34.290 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.187 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.185 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 34.174 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 34.015 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.376 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.366 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 35.503 |
| SRR2868004 | Drought Stress (root) | 22.901 |
| SRR2967015 | Control (root) | 44.613 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.360 |
| SRR9715740 | Leaf | 4.691 |
| SRR9715741 | Leaf | 4.110 |
| SRR9715739 | Root | 3.578 |
| SRR9715742 | Root | 7.327 |
| SRR9715743 | Root | 5.431 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.001 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.051 |
| SRR8749030 | Uninduced | 0.053 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 58.301 |
| SRR8400027 | Control - Root | 62.532 |