Gene detail information of Glyur000404s00017752 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003520209.1 | 1.75E-55 | PREDICTED: uncharacterized protein LOC100786285 [Glycine max] |
| trEMBL | tr|I1JFB0|I1JFB0_SOYBN | 7.00E-56 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G16660.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00404 | 154067 | 156689 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.963 |
| SRR1783600 | control | 0.967 |
| SRR1783602 | moderate drought stress | 1.383 |
| SRR1811619 | moderate drought stress | 1.595 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.418 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.590 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.450 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.451 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.197 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.236 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.171 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.171 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 19.769 |
| SRR2868004 | Drought Stress (root) | 10.613 |
| SRR2967015 | Control (root) | 14.596 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.322 |
| SRR9715740 | Leaf | 0.622 |
| SRR9715741 | Leaf | 0.185 |
| SRR9715739 | Root | 0.189 |
| SRR9715742 | Root | 0.950 |
| SRR9715743 | Root | 0.742 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.119 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.103 |
| SRR8749030 | Uninduced | 0.533 |
| SRR8749031 | Uninduced | 0.111 |
| SRR8749032 | Uninduced | 0.240 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 17.708 |
| SRR8400027 | Control - Root | 17.354 |