Gene detail information of Glyur000404s00017746 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KGN57021.1 | 3.41E-17 | hypothetical protein Csa_3G150005 [Cucumis sativus] |
| trEMBL | tr|A0A0A0LAF3|A0A0A0LAF3_CUCSA | 1.00E-17 | Uncharacterized protein {ECO:0000313|EMBL:KGN57021.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00404 | 110188 | 110656 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.015 |
| SRR1783600 | control | 4.779 |
| SRR1783602 | moderate drought stress | 4.213 |
| SRR1811619 | moderate drought stress | 3.794 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 16.427 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 19.447 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 88.839 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 89.423 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 30.526 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 31.612 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.689 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.639 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.154 |
| SRR2967015 | Control (root) | 0.031 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.257 |
| SRR9715742 | Root | 0.153 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.529 |
| SRR8749028 | MeJA induced 9h | 15.184 |
| SRR8749029 | MeJA induced 9h | 76.975 |
| SRR8749030 | Uninduced | 3.623 |
| SRR8749031 | Uninduced | 1.145 |
| SRR8749032 | Uninduced | 148.252 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.000 |
| SRR8400027 | Control - Root | 0.013 |