Gene detail information of Glyur000402s00033325 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G23200.1 | 6.00E-144 | |
| NR | XP_004505812.1 | 0 | PREDICTED: uncharacterized protein LOC101506772 [Cicer arietinum] |
| trEMBL | tr|A0A072VHP0|A0A072VHP0_MEDTR | 0 | Uncharacterized protein {ECO:0000313|EMBL:KEH40923.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00402 | 117891 | 120763 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.011 |
| SRR1783600 | control | 4.023 |
| SRR1783602 | moderate drought stress | 3.431 |
| SRR1811619 | moderate drought stress | 3.494 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.748 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.483 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.826 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.591 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.282 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.154 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.935 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.898 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.181 |
| SRR2868004 | Drought Stress (root) | 9.264 |
| SRR2967015 | Control (root) | 9.167 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.830 |
| SRR9715740 | Leaf | 5.988 |
| SRR9715741 | Leaf | 5.653 |
| SRR9715739 | Root | 1.383 |
| SRR9715742 | Root | 2.695 |
| SRR9715743 | Root | 2.602 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 13.084 |
| SRR8749028 | MeJA induced 9h | 9.592 |
| SRR8749029 | MeJA induced 9h | 6.909 |
| SRR8749030 | Uninduced | 2.657 |
| SRR8749031 | Uninduced | 0.625 |
| SRR8749032 | Uninduced | 2.310 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.535 |
| SRR8400027 | Control - Root | 7.709 |