Gene detail information of Glyur000401s00023646 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G03760.1 | 2.00E-82 | sulphotransferase 12 |
| NR | XP_003530555.2 | 4.34E-166 | PREDICTED: cytosolic sulfotransferase 5-like [Glycine max] |
| Swissprot | tr|P52839|SOT12_ARATH | 8.00E-110 | Cytosolic sulfotransferase 12 |
| trEMBL | tr|I1KX12|I1KX12_SOYBN | 7.00E-167 | Sulfotransferase {ECO:0000256|RuleBase:RU361155} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00401 | 30560 | 31576 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000401s00023646.1 | PF00685.22 | Sulfotransfer_1 | 68 | 333 | 2.90E-71 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 30.963 |
| SRR1783600 | control | 30.385 |
| SRR1783602 | moderate drought stress | 5.006 |
| SRR1811619 | moderate drought stress | 4.929 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 24.680 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 23.776 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.049 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.002 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.457 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.456 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 178.634 |
| SRR2868004 | Drought Stress (root) | 92.753 |
| SRR2967015 | Control (root) | 124.102 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.331 |
| SRR9715740 | Leaf | 1.539 |
| SRR9715741 | Leaf | 0.384 |
| SRR9715739 | Root | 12.861 |
| SRR9715742 | Root | 17.165 |
| SRR9715743 | Root | 15.341 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.181 |
| SRR8749028 | MeJA induced 9h | 0.021 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 28.909 |
| SRR8400027 | Control - Root | 66.831 |