Gene detail information of Glyur000399s00017832 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G48380.1 | 1.00E-67 | root hair initiation protein root hairless 1 (RHL1) |
| NR | XP_007152545.1 | 0 | hypothetical protein PHAVU_004G139000g [Phaseolus vulgaris] |
| Swissprot | tr|O81242|RHL1_ARATH | 5.00E-96 | DNA-binding protein RHL1 |
| trEMBL | tr|V7C309|V7C309_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW24539.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00399 | 139789 | 145541 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.338 |
| SRR1783600 | control | 4.327 |
| SRR1783602 | moderate drought stress | 6.732 |
| SRR1811619 | moderate drought stress | 6.530 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.252 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.240 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.336 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.599 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.638 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.966 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.612 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.455 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.154 |
| SRR2868004 | Drought Stress (root) | 8.628 |
| SRR2967015 | Control (root) | 9.301 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.257 |
| SRR9715740 | Leaf | 5.169 |
| SRR9715741 | Leaf | 4.190 |
| SRR9715739 | Root | 0.226 |
| SRR9715742 | Root | 2.530 |
| SRR9715743 | Root | 2.326 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.908 |
| SRR8749028 | MeJA induced 9h | 4.635 |
| SRR8749029 | MeJA induced 9h | 4.819 |
| SRR8749030 | Uninduced | 0.893 |
| SRR8749031 | Uninduced | 0.454 |
| SRR8749032 | Uninduced | 0.640 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.188 |
| SRR8400027 | Control - Root | 10.807 |