Gene detail information of Glyur000397s00020484 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G10740.2 | 7.00E-170 | alpha/beta-Hydrolases superfamily protein |
| NR | XP_004489813.1 | 0 | PREDICTED: lipase-like, partial [Cicer arietinum] |
| COG | YP_001253396.1 | 4.00E-27 | secreted lipase [Clostridium botulinum A str. ATCC 3502] |
| trEMBL | tr|C6TBW3|C6TBW3_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G04250.4} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00397 | 160636 | 169683 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.005 |
| SRR1783600 | control | 5.108 |
| SRR1783602 | moderate drought stress | 3.599 |
| SRR1811619 | moderate drought stress | 3.409 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 29.612 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 29.194 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 38.353 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 36.566 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 16.548 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.731 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.163 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.016 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 23.637 |
| SRR2868004 | Drought Stress (root) | 40.496 |
| SRR2967015 | Control (root) | 25.824 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 69.836 |
| SRR9715740 | Leaf | 41.219 |
| SRR9715741 | Leaf | 93.319 |
| SRR9715739 | Root | 8.714 |
| SRR9715742 | Root | 32.564 |
| SRR9715743 | Root | 27.598 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 131.021 |
| SRR8749028 | MeJA induced 9h | 196.686 |
| SRR8749029 | MeJA induced 9h | 144.004 |
| SRR8749030 | Uninduced | 42.900 |
| SRR8749031 | Uninduced | 105.351 |
| SRR8749032 | Uninduced | 72.285 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 22.579 |
| SRR8400027 | Control - Root | 24.229 |