Gene detail information of Glyur000397s00020474 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G40460.1 | 1.00E-23 | |
| NR | XP_003552039.1 | 1.97E-45 | PREDICTED: uncharacterized protein LOC100790537 [Glycine max] |
| trEMBL | tr|I1N1K3|I1N1K3_SOYBN | 7.00E-46 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G20760.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00397 | 102313 | 102666 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 53.064 |
| SRR1783600 | control | 53.888 |
| SRR1783602 | moderate drought stress | 76.711 |
| SRR1811619 | moderate drought stress | 75.808 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 108.662 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 109.577 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 74.798 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 74.952 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 133.621 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 134.502 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.876 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.781 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 39.268 |
| SRR2868004 | Drought Stress (root) | 42.464 |
| SRR2967015 | Control (root) | 55.927 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 11.481 |
| SRR9715740 | Leaf | 14.118 |
| SRR9715741 | Leaf | 14.934 |
| SRR9715739 | Root | 29.167 |
| SRR9715742 | Root | 49.116 |
| SRR9715743 | Root | 46.797 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 23.426 |
| SRR8749028 | MeJA induced 9h | 10.871 |
| SRR8749029 | MeJA induced 9h | 23.664 |
| SRR8749030 | Uninduced | 5.901 |
| SRR8749031 | Uninduced | 1.826 |
| SRR8749032 | Uninduced | 2.760 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 87.806 |
| SRR8400027 | Control - Root | 71.252 |