Gene detail information of Glyur000393s00028766 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G71780.1 | 1.00E-57 | |
| NR | AFK47733.1 | 1.60E-100 | unknown [Lotus japonicus] |
| trEMBL | tr|I3T5E1|I3T5E1_LOTJA | 6.00E-101 | Uncharacterized protein {ECO:0000313|EMBL:AFK47733.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00393 | 108048 | 113329 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.343 |
| SRR1783600 | control | 11.025 |
| SRR1783602 | moderate drought stress | 22.832 |
| SRR1811619 | moderate drought stress | 19.738 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 21.145 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 17.835 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 12.602 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 13.471 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 18.520 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 17.811 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.977 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.599 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 23.732 |
| SRR2868004 | Drought Stress (root) | 22.984 |
| SRR2967015 | Control (root) | 24.402 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 24.113 |
| SRR9715740 | Leaf | 44.537 |
| SRR9715741 | Leaf | 29.995 |
| SRR9715739 | Root | 50.451 |
| SRR9715742 | Root | 34.728 |
| SRR9715743 | Root | 37.602 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 12.650 |
| SRR8749028 | MeJA induced 9h | 8.304 |
| SRR8749029 | MeJA induced 9h | 7.051 |
| SRR8749030 | Uninduced | 6.888 |
| SRR8749031 | Uninduced | 3.956 |
| SRR8749032 | Uninduced | 8.257 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 29.441 |
| SRR8400027 | Control - Root | 26.374 |