Gene detail information of Glyur000392s00023195 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G06980.1 | 4.00E-45 | |
| NR | XP_004490679.1 | 3.67E-67 | PREDICTED: uncharacterized protein LOC101504436 [Cicer arietinum] |
| trEMBL | tr|C6SYD4|C6SYD4_SOYBN | 1.00E-66 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G06420.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00392 | 58114 | 58572 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000392s00023195.1 | PF14009.1 | DUF4228 | 1 | 122 | 3.60E-32 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.243 |
| SRR1783600 | control | 10.649 |
| SRR1783602 | moderate drought stress | 9.675 |
| SRR1811619 | moderate drought stress | 9.325 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 40.831 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 38.008 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 13.779 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 13.162 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 17.757 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 16.875 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.006 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.523 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.691 |
| SRR2868004 | Drought Stress (root) | 9.186 |
| SRR2967015 | Control (root) | 7.846 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 78.415 |
| SRR9715740 | Leaf | 55.129 |
| SRR9715741 | Leaf | 194.929 |
| SRR9715739 | Root | 15.311 |
| SRR9715742 | Root | 44.853 |
| SRR9715743 | Root | 37.434 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 250.620 |
| SRR8749028 | MeJA induced 9h | 278.013 |
| SRR8749029 | MeJA induced 9h | 311.080 |
| SRR8749030 | Uninduced | 110.692 |
| SRR8749031 | Uninduced | 151.613 |
| SRR8749032 | Uninduced | 459.096 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.206 |
| SRR8400027 | Control - Root | 7.566 |