Gene detail information of Glyur000391s00016064 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G52130.1 | 2.00E-29 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
| NR | XP_004514935.1 | 3.36E-52 | PREDICTED: putative lipid-transfer protein DIR1-like [Cicer arietinum] |
| trEMBL | tr|K7L6V8|K7L6V8_SOYBN | 4.00E-52 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G16160.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00391 | 113049 | 113667 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000391s00016064.1 | PF14368.1 | LTP_2 | 4 | 85 | 7.00E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.081 |
| SRR1783600 | control | 4.858 |
| SRR1783602 | moderate drought stress | 3.248 |
| SRR1811619 | moderate drought stress | 3.522 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.772 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.244 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.910 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.291 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.886 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.448 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.719 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.424 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.913 |
| SRR2868004 | Drought Stress (root) | 2.500 |
| SRR2967015 | Control (root) | 2.112 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.679 |
| SRR9715740 | Leaf | 1.099 |
| SRR9715741 | Leaf | 1.031 |
| SRR9715739 | Root | 0.090 |
| SRR9715742 | Root | 0.927 |
| SRR9715743 | Root | 0.232 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.764 |
| SRR8749028 | MeJA induced 9h | 1.341 |
| SRR8749029 | MeJA induced 9h | 0.684 |
| SRR8749030 | Uninduced | 2.188 |
| SRR8749031 | Uninduced | 0.548 |
| SRR8749032 | Uninduced | 0.446 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.481 |
| SRR8400027 | Control - Root | 2.263 |