Gene detail information of Glyur000390s00023107 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G15802.1 | 5.00E-21 | |
| NR | AFK48336.1 | 7.61E-62 | unknown [Lotus japonicus] |
| trEMBL | tr|I3T744|I3T744_LOTJA | 3.00E-62 | Uncharacterized protein {ECO:0000313|EMBL:AFK48336.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00390 | 117261 | 119626 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.717 |
| SRR1783600 | control | 9.029 |
| SRR1783602 | moderate drought stress | 12.416 |
| SRR1811619 | moderate drought stress | 12.571 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 26.291 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 26.988 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.546 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.932 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 35.504 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 34.118 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 55.402 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 57.070 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 16.015 |
| SRR2868004 | Drought Stress (root) | 18.569 |
| SRR2967015 | Control (root) | 20.225 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 22.981 |
| SRR9715740 | Leaf | 46.245 |
| SRR9715741 | Leaf | 20.995 |
| SRR9715739 | Root | 12.453 |
| SRR9715742 | Root | 11.377 |
| SRR9715743 | Root | 9.365 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.881 |
| SRR8749028 | MeJA induced 9h | 7.580 |
| SRR8749029 | MeJA induced 9h | 9.327 |
| SRR8749030 | Uninduced | 2.680 |
| SRR8749031 | Uninduced | 1.097 |
| SRR8749032 | Uninduced | 3.271 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 19.219 |
| SRR8400027 | Control - Root | 19.235 |