Gene detail information of Glyur000390s00023106 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G24530.1 | 1.00E-13 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
| NR | XP_004507291.1 | 2.64E-72 | PREDICTED: hyoscyamine 6-dioxygenase-like [Cicer arietinum] |
| Swissprot | tr|P24397|HY6H_HYONI | 5.00E-13 | Hyoscyamine 6-dioxygenase |
| trEMBL | tr|I1N6E8|I1N6E8_SOYBN | 6.00E-70 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G04280.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00390 | 102887 | 111691 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000390s00023106.1 | PF14226.1 | DIOX_N | 53 | 130 | 6.60E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 20.858 |
| SRR1783600 | control | 21.464 |
| SRR1783602 | moderate drought stress | 17.073 |
| SRR1811619 | moderate drought stress | 17.424 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 23.312 |
| SRR2868004 | Drought Stress (root) | 34.003 |
| SRR2967015 | Control (root) | 16.190 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.580 |
| SRR9715740 | Leaf | 1.051 |
| SRR9715741 | Leaf | 1.608 |
| SRR9715739 | Root | 5.815 |
| SRR9715742 | Root | 7.671 |
| SRR9715743 | Root | 6.466 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.200 |
| SRR8749028 | MeJA induced 9h | 0.265 |
| SRR8749029 | MeJA induced 9h | 0.067 |
| SRR8749030 | Uninduced | 0.021 |
| SRR8749031 | Uninduced | 0.394 |
| SRR8749032 | Uninduced | 0.408 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 53.784 |
| SRR8400027 | Control - Root | 34.981 |