Gene detail information of Glyur000390s00023095 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G02220.1 | 4.00E-07 | |
| NR | AFK34393.1 | 1.21E-29 | unknown [Lotus japonicus] |
| trEMBL | tr|I3S2A1|I3S2A1_LOTJA | 5.00E-30 | Uncharacterized protein {ECO:0000313|EMBL:AFK34393.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00390 | 19731 | 22419 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 21.391 |
| SRR1783600 | control | 21.397 |
| SRR1783602 | moderate drought stress | 22.349 |
| SRR1811619 | moderate drought stress | 22.392 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 22.350 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 22.022 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 41.924 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 42.946 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 23.817 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 23.811 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.899 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.706 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 39.382 |
| SRR2868004 | Drought Stress (root) | 29.345 |
| SRR2967015 | Control (root) | 28.614 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 18.176 |
| SRR9715740 | Leaf | 22.767 |
| SRR9715741 | Leaf | 16.525 |
| SRR9715739 | Root | 1.186 |
| SRR9715742 | Root | 7.364 |
| SRR9715743 | Root | 6.057 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 35.847 |
| SRR8749028 | MeJA induced 9h | 19.897 |
| SRR8749029 | MeJA induced 9h | 24.154 |
| SRR8749030 | Uninduced | 13.918 |
| SRR8749031 | Uninduced | 5.679 |
| SRR8749032 | Uninduced | 7.719 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 27.510 |
| SRR8400027 | Control - Root | 25.397 |