Gene detail information of Glyur000390s00023094 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G29635.1 | 1.00E-67 | HXXXD-type acyl-transferase family protein |
| NR | XP_004507302.1 | 0 | PREDICTED: malonyl-coenzyme A:anthocyanin 3-O-glucoside-6''-O-malonyltransferase-like [Cicer arietinum] |
| Swissprot | tr|Q9FNP9|AGCT_ARATH | 7.00E-78 | Agmatine coumaroyltransferase {ECO:0000303|PubMed:19521717} |
| trEMBL | tr|A0A072U623|A0A072U623_MEDTR | 0 | Malonyl-CoA:isoflavone 7-O-glucoside malonyltransferase {ECO:0000313|EMBL:KEH25127.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00390 | 16181 | 17731 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000390s00023094.1 | PF02458.10 | Transferase | 22 | 196 | 5.10E-22 |
| Glyur000390s00023094.1 | PF02458.10 | Transferase | 296 | 506 | 1.40E-27 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 29.779 |
| SRR1783600 | control | 29.212 |
| SRR1783602 | moderate drought stress | 28.065 |
| SRR1811619 | moderate drought stress | 28.832 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.810 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.875 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.075 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.144 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 15.957 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 16.800 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.120 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.079 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 59.653 |
| SRR2868004 | Drought Stress (root) | 40.408 |
| SRR2967015 | Control (root) | 29.473 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.112 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.055 |
| SRR9715739 | Root | 9.202 |
| SRR9715742 | Root | 16.445 |
| SRR9715743 | Root | 14.882 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.120 |
| SRR8749028 | MeJA induced 9h | 0.158 |
| SRR8749029 | MeJA induced 9h | 0.283 |
| SRR8749030 | Uninduced | 0.053 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.112 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 28.297 |
| SRR8400027 | Control - Root | 33.923 |