Gene detail information of Glyur000390s00023091.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00390 | 7131 | 7391 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K11643 | CHD4, MI2B | EC:3.6.4.12 | Viral carcinogenesis | map05203 |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.888 |
| SRR1783600 | control | 3.071 |
| SRR1783602 | moderate drought stress | 10.140 |
| SRR1811619 | moderate drought stress | 7.133 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.251 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.208 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.302 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.091 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.848 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.406 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.181 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.319 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.380 |
| SRR2868004 | Drought Stress (root) | 2.801 |
| SRR2967015 | Control (root) | 1.140 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.256 |
| SRR9715740 | Leaf | 0.509 |
| SRR9715741 | Leaf | 0.777 |
| SRR9715739 | Root | 4.869 |
| SRR9715742 | Root | 3.501 |
| SRR9715743 | Root | 2.415 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.468 |
| SRR8749028 | MeJA induced 9h | 3.875 |
| SRR8749029 | MeJA induced 9h | 4.338 |
| SRR8749030 | Uninduced | 0.188 |
| SRR8749031 | Uninduced | 2.102 |
| SRR8749032 | Uninduced | 3.475 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.056 |
| SRR8400027 | Control - Root | 6.800 |