Gene detail information of Glyur000389s00028192 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G53980.2 | 6.00E-24 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
| NR | AFK41239.1 | 6.63E-50 | unknown [Lotus japonicus] |
| trEMBL | tr|I3SLU7|I3SLU7_LOTJA | 2.00E-50 | Uncharacterized protein {ECO:0000313|EMBL:AFK41239.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00389 | 155575 | 156542 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000389s00028192.1 | PF14368.1 | LTP_2 | 18 | 100 | 4.30E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 294.751 |
| SRR1783600 | control | 293.634 |
| SRR1783602 | moderate drought stress | 204.814 |
| SRR1811619 | moderate drought stress | 202.048 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4219.130 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4187.812 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.232 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.761 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3559.067 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3589.627 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 22.343 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 23.933 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2885.972 |
| SRR2868004 | Drought Stress (root) | 6705.064 |
| SRR2967015 | Control (root) | 1711.045 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 22.690 |
| SRR9715740 | Leaf | 15.725 |
| SRR9715741 | Leaf | 11.042 |
| SRR9715739 | Root | 670.655 |
| SRR9715742 | Root | 2053.691 |
| SRR9715743 | Root | 1853.723 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.208 |
| SRR8749028 | MeJA induced 9h | 0.007 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.091 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 621.676 |
| SRR8400027 | Control - Root | 270.399 |