Gene detail information of Glyur000389s00028191 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G02020.1 | 2.00E-25 | |
| NR | XP_004492373.1 | 5.01E-78 | PREDICTED: uncharacterized protein LOC101514538 [Cicer arietinum] |
| trEMBL | tr|A0A072U1L2|A0A072U1L2_MEDTR | 1.00E-76 | Plant/T7H20-70 protein {ECO:0000313|EMBL:KEH23048.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00389 | 150582 | 153521 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.962 |
| SRR1783600 | control | 8.618 |
| SRR1783602 | moderate drought stress | 35.897 |
| SRR1811619 | moderate drought stress | 35.558 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 34.576 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 34.856 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 36.585 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 35.063 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 38.825 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 38.266 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.988 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.034 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 31.964 |
| SRR2868004 | Drought Stress (root) | 189.281 |
| SRR2967015 | Control (root) | 359.488 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.524 |
| SRR9715740 | Leaf | 10.619 |
| SRR9715741 | Leaf | 12.565 |
| SRR9715739 | Root | 55.539 |
| SRR9715742 | Root | 53.033 |
| SRR9715743 | Root | 51.876 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.139 |
| SRR8749028 | MeJA induced 9h | 5.673 |
| SRR8749029 | MeJA induced 9h | 0.756 |
| SRR8749030 | Uninduced | 1.892 |
| SRR8749031 | Uninduced | 1.668 |
| SRR8749032 | Uninduced | 0.590 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 29.827 |
| SRR8400027 | Control - Root | 23.385 |